Gene Pecwa_3270 details

Gene Information

• Locus tag: Pecwa_3270
• ID: 8531686
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3571238
• End bp: 3573229
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 52%
• Product: cytochrome o ubiquinol oxidase, subunit I
• Protein accession: YP_003260619
• Protein GI: 261822513

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCGGAA AACTTACACT CGATGCGGTT CCGTACCACG AACCCATTAT TATGGTCACC 
GTGGCGGCGA TCATCGTCGG CGGCCTTGCG CTGCTGGCGG CAATAACCTA TTTCGGTAAG 
TGGAAGTGGC TGTGGACTGA GTGGTTCACC TCCGTCGACC ACAAGAAAAT CGGTATCATG 
TACGTCATCG TCGGTTTGGT GATGATGATT CGTGGCTTTG CCGATGCCAT CATGATGCGC 
GGCCAACAGG TTCTTGCCTC TGCCGGGCAT GAGGGCTTCC TAAACGCTCA CCACTACGAT 
CAGATTTTCA CCGCGCACGG TGTCATCATG ATCTTCTTCG TGGCAACTCC GTTCGTTGTT 
GGCTTGATGA ACCTTGCGGT TCCCTTGCAG ATCGGTGCGC GTGATGTTGC TTTCCCCTTC 
CTGAACTCCC TCAGTTTCTG GCTGTTTGTG GCTGGCGTTG TCTTGATCAA CCTCTCTCTC 
GGGGTAGGTG AGTTCGCGCA GACTGGCTGG GTGGCCTATC CGCCACTTTC AGGGAAGGAG 
TACAGTCCCG GCGTTGGGGT CGATTACTGG ATATGGAGTC TACAGATATC CGGTATCGGT 
ACCACGCTGA CTGGCGTTAA CTTCTTCGCG ACGATTCTGA AGATGCGCGC GCCAGGCATG 
ACGCTGATGA AAATGCCGGT ATTTACCTGG ACAGCGCTGT GTACCAACGT GCTGATCATT 
GCCGCATTCC CGATATTAAC CGTTACCATT GCGCTACTGA CGCTTGACCG TTACCTCGGC 
ACCCATTTCT TTACCAATGA TATGGGTGGC AACATGATGA TGTACATCAA CCTGATTTGG 
GCATGGGGTC ATCCTGAGGT TTACATTCTG GTGCTGCCGA TATTCGGTGT TTACTCCGAA 
GTGGTTGCCA CCTTCTGTAG AAAGCGTCTG TTTGGCTACA CCTCACTGGT ATGGGCCACC 
ATTGCGATTA CGGTTCTGTC GTTTATCGTT TGGCTGCACC ACTTCTTTAC CATGGGGTCC 
GGCGCGAACG TCAACGCCTT CTTTGGTATA GCCACTATGA TTATTTCAAT CCCAACCGGG 
GTTAAAATCT TCAACTGGCT GTTCACCATG TACCAAGGTC GTATTCAGCC CCACTCCACG 
ATGCTGTGGA CCACAGGCTT CATCATCACC TTCACCATCG GTGGGATGAC AGGCGTACTG 
CTGGCCGTAC CGGGCGCAAA CTTTGTCTTG CACAACAGCC TGTTCCTGAT TGCTCACTTC 
CATAACGTGA TCATCGGCGG CGTGGTGTTT GGTTGCTTCG CAGGTATTAC TTACTGGTTC 
CCGAAAGCCT TTGGTTTCAC TCTGAACGAA ACTTGGGGTA AACGCGCGTT CTGGTTCTGG 
ATTATCGGCT TCTTCGTTGC TTTCATGCCG CTGTATATTC TCGGCTTCAT GGGCATGACG 
CGTCGTCTGA GCCAGCAAAT CAGCCCTGAA TTCCACACCT TGTTGGTTGT GGCCTCCATC 
GGCGCGGTAT TGATCGGTAT CGGTGTGCTG TGTCAGGTTA TCCAGTTCTA TGTCAGTATC 
CGTGACCGTG ACCAGAACCG CGATCTAACG GGCGATCCGT GGGGTGGACG CACGCTGGAG 
TGGGCAACGT CTTCTCCTGC GCCGTTCTAT AACTTCGCCA TCGTGCCACA CATCGACGAG 
CGTGATGCAT TCTGGGAAGC AAAAGAGAAA GGTGAAGCTT ACAAGCGCCC TGCCAGCTAT 
GAAGAAATTC ACATGCCGAA GAATACCGGT GCTGGTGTGA TTATCTCCGC ATTCAGTCTG 
GTATTCGGTT TTGCGATGAT CTGGCATATC TGGTGGCTGG CCATCGCTGG CTTTGCAGGC 
ATGATTGTGA CCTGGATTGT GCATAGCTTT AATCAGGACG TGGATTACTA CGTGCCGGTT 
AAAGAAATTG AGCAAATTGA GAATCAGAAC TTTGATCAAC TCAGTAAGGC AGGCGTGAAA 
CATGTCAACT GA 

 

Protein sequence

MFGKLTLDAV PYHEPIIMVT VAAIIVGGLA LLAAITYFGK WKWLWTEWFT SVDHKKIGIM 
YVIVGLVMMI RGFADAIMMR GQQVLASAGH EGFLNAHHYD QIFTAHGVIM IFFVATPFVV 
GLMNLAVPLQ IGARDVAFPF LNSLSFWLFV AGVVLINLSL GVGEFAQTGW VAYPPLSGKE 
YSPGVGVDYW IWSLQISGIG TTLTGVNFFA TILKMRAPGM TLMKMPVFTW TALCTNVLII 
AAFPILTVTI ALLTLDRYLG THFFTNDMGG NMMMYINLIW AWGHPEVYIL VLPIFGVYSE 
VVATFCRKRL FGYTSLVWAT IAITVLSFIV WLHHFFTMGS GANVNAFFGI ATMIISIPTG 
VKIFNWLFTM YQGRIQPHST MLWTTGFIIT FTIGGMTGVL LAVPGANFVL HNSLFLIAHF 
HNVIIGGVVF GCFAGITYWF PKAFGFTLNE TWGKRAFWFW IIGFFVAFMP LYILGFMGMT 
RRLSQQISPE FHTLLVVASI GAVLIGIGVL CQVIQFYVSI RDRDQNRDLT GDPWGGRTLE 
WATSSPAPFY NFAIVPHIDE RDAFWEAKEK GEAYKRPASY EEIHMPKNTG AGVIISAFSL 
VFGFAMIWHI WWLAIAGFAG MIVTWIVHSF NQDVDYYVPV KEIEQIENQN FDQLSKAGVK 
HVN