Gene Pecwa_3226 details

Gene Information

• Locus tag: Pecwa_3226
• ID: 8531641
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3520955
• End bp: 3523108
• Gene Length: 2154 bp
• Protein Length: 717 aa
• Translation table: 11
• GC content: 54%
• Product: carbon starvation protein CstA
• Protein accession: YP_003260575
• Protein GI: 261822469

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00258818
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAGCA ATTCCATTCT TAAACACATC CCCTGGATGA TTCTTGGAAT CATTGGGGCT 
GCCTGCCTCG GCGTAGTCGC ACTACGTCGC GGTGAGCATG TCAGTGCCTT ATGGATTATT 
GTTGCTTCTG TCGCCGTTTA CCTCGTGGCC TATCGATACT ACAGCCTGTA TATCGCACAA 
AAAGTCATGC AGTTGGATCC GACCAGAGCA ACCCCTGCCG TTGTCAATAA CGACGGTCTT 
AACTATGTAC CGACGAACCG TAACGTGCTG TTCGGGCACC ACTTCGCTGC TATCGCTGGC 
GCCGGTCCGT TGGTCGGGCC GGTACTGGCC GCGCAGGTCG GCTACCTGCC TGGCACCTTA 
TGGTTGCTGG GTGGTGTGGT GCTGGCGGGT GCCGTGCAGG ACTTCATGGT GCTGTTTATT 
TCGACCCGTC GTAACGGCGC GTCGTTAGGC GAAATTGTTA AGAAAGAACT TGGCCCGGTA 
CCGGGTACGA TTGCACTGTT CGGCTGCTTC CTTATTATGA TCATCATTCT TGCCGTGCTG 
GCATTGATTG TTGTGAAAGC GCTGGCAGAA AGTCCGTGGG GTGTCTTTAC CGTTTGTTCT 
ACGGTGCCAA TCGCGCTGTT CATGGGCGTT TACATGCGCT TTATCCGTCC GGGTAAAGTC 
GGTGAAATCT CAGTAATGGG GATCGTGCTG CTGGTGCTGG CGATCTGGTT TGGTGGCGTA 
GTGGCACACG ACCCGTACTG GGGGCCAGCG CTGACCTTCA AAGATACGAC CATCACCTAT 
ACGCTGATTG GCTATGCCTT CGTATCCGCA CTGCTGCCAG TATGGTTGAT TCTGGCGCCG 
CGTGACTATC TGGCGACCTT CCTGAAAATT GGTGTCATCG TCGGTCTGGC GATTGGTATC 
GTGATCCTGA ATCCCGATCT GAAAATGCCA GCGGTAACGC AGTTTGTGGA TGGCACCGGT 
CCGGTCTGGA AAGGTACGCT GTTCCCGTTC CTGTTTATTA CTATCGCCTG TGGTGCTGTG 
TCTGGCTTCC ACGCACTGAT TGCTTCTGGT ACTACACCGA AATTGATGGC TAACGAGAAA 
GATGCGCGTT TCATCGGTTA CGGTGCGATG TTGATGGAAT CTTTCGTAGC GATCATGGCG 
TTGGTTGCGG CGTCTATCAT CGAACCAGGT CTCTACTTTG CGATGAATAC CCCGCCAGCG 
GCATTGGGTA TTACGATGCC GGATCTGCAT AGATTGGGCA CAGCGGATGC GCCGATGATT 
CTGGCACAGT TGCAGGACGT ATCTGCACAC GCGGCGGCGA CCGTTAGCTC CTGGGGCTTC 
GTCATTTCTC CAGAGCAAAT TCTGCAAACG GCGAAAGACA TCGGTGAACC TTCCGTTCTG 
AATCGCGCAG GCGGTGCACC AACGCTGGCT GTCGGTATCG CACACGTGTT CCACCAGATT 
ATTCCGGGTG CCGATATGGG CTTCTGGTAT CACTTCGGTA TTCTGTTTGA AGCGTTGTTT 
ATTCTGACGG CGCTGGATGC GGGTACGCGT GCTGGTCGTT TCATGTTGCA GGACCTGTTG 
GGTAACTTCG TTCCTTTCCT GAAGAAAACC GACTCGCTGA TTGCTGGTAT GATTGGTACG 
GCGGGCTGCG TCGGTCTGTG GGGCTACCTG CTGTACCAAG GTGTAGTCGA CCCGCTGGGC 
GGCGTGAAGA GCCTGTGGCC GTTGTTCGGT ATATCTAACC AGATGCTGGC TGCGGTGGCG 
CTGGTGCTGG GTACGGTCAT CCTGATTAAG ATGAAACGTA CACAGTACAT TTGGGTCACG 
CTGGTTCCGG CTGTTTGGTT GCTGATTTGT ACCACGTGGG CGCTGGGTCT GAAACTGTTC 
AGCGACAACC CGCAACTGGA AGGCTTCTTC TACATGGCGA ACATGTTCAA GGGCAAAATT 
GCAGAAGGCG GTGCCGATCT GAGCGCGCAG CAGATTTCGA ACATGAATCA TATCGTGACC 
AACAACTATA CCAACGCTGG TCTGAGCATT CTGTTCCTGA TCGTGGTGTA CAGCATTATC 
GCGTACGGTA TTAAAGCGGC ACTGGCTGCA CGTAAAGTGG CTGAACGTAC CGATCAGGAA 
ACGCCGTATG TTCCGGTTCC TGAGGGTGGC GTGAAAGTCT CTTCCGGTCA CTAA 

 

Protein sequence

MKSNSILKHI PWMILGIIGA ACLGVVALRR GEHVSALWII VASVAVYLVA YRYYSLYIAQ 
KVMQLDPTRA TPAVVNNDGL NYVPTNRNVL FGHHFAAIAG AGPLVGPVLA AQVGYLPGTL 
WLLGGVVLAG AVQDFMVLFI STRRNGASLG EIVKKELGPV PGTIALFGCF LIMIIILAVL 
ALIVVKALAE SPWGVFTVCS TVPIALFMGV YMRFIRPGKV GEISVMGIVL LVLAIWFGGV 
VAHDPYWGPA LTFKDTTITY TLIGYAFVSA LLPVWLILAP RDYLATFLKI GVIVGLAIGI 
VILNPDLKMP AVTQFVDGTG PVWKGTLFPF LFITIACGAV SGFHALIASG TTPKLMANEK 
DARFIGYGAM LMESFVAIMA LVAASIIEPG LYFAMNTPPA ALGITMPDLH RLGTADAPMI 
LAQLQDVSAH AAATVSSWGF VISPEQILQT AKDIGEPSVL NRAGGAPTLA VGIAHVFHQI 
IPGADMGFWY HFGILFEALF ILTALDAGTR AGRFMLQDLL GNFVPFLKKT DSLIAGMIGT 
AGCVGLWGYL LYQGVVDPLG GVKSLWPLFG ISNQMLAAVA LVLGTVILIK MKRTQYIWVT 
LVPAVWLLIC TTWALGLKLF SDNPQLEGFF YMANMFKGKI AEGGADLSAQ QISNMNHIVT 
NNYTNAGLSI LFLIVVYSII AYGIKAALAA RKVAERTDQE TPYVPVPEGG VKVSSGH