| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3223 |
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| Symbol | |
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| ID | 8531638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3517954 |
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| End bp | 3519336 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | glycoside hydrolase family 28 |
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| Protein accession | YP_003260572 |
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| Protein GI | 261822466 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.362624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGTG GTCTTGCTCT GTCATTAATG GCTTCCTGCA TCACGCTGGG TATTCAAGCT
GGTACGGCAC AGGCCGCCAG TTCAGTGAAA TTCCCAGATA AAACCTGTGA CGTCACACAA
TACGGGGCCG AAGGTCACCG CCTACAGATC GCACTAAATA CCGAAGCTTT TCAGAAAGCG
ATTGATGATT GCGCGGCGGC TGGTGGCGGA ACGGTACACG TTCCTCGCGG TAACTATCTG
GTCGATCCGC TGTTCCTGAA AAGTAACATC CGACTGGATT TGGCAAAAGA TGCAACTATC
GTCGCCTCGA CTGAAGTCGC GGCGTATCGC GCGACGGAAA AAACCAAGTA CGCTGAAGCG
GAAAATGGTT GGCTTCCCTT TATCAGTATT GCTGATGCAC AAAATGTGGC GATTACTGGC
GAAGGCACCA TTGATGGGCA GGGTGCCGTC TGGTGGGAAC GCTGGCGTGA GAATATTCGA
GCCACCGGCA AGAAAGGTGG AACCGACCGC CCCCGTCTGA TTTATATCAA AAGTTCTAGT
AACGTGCTGG TGGACAGCGT CACGCTCACC CATTCCCCTA GCTTCCACAT TGTGATGCGT
TACTCGCATG ATGTGGATGT TAACGGCACG CGTATTCTGT CGCCGTGGCA TGCACCAAAC
ACCGATGCTA TCGACCCGAT CGACAGCCAG AATATCCGTA TCACCAATAA TTATATCGAC
TGTAATGACG ACCATATTGC GATAAAAGCC GAGAAGCCAG ATAGCCGCTT CCCGAATGGC
GTCGTGGATA ACATCTATAT TGCCAACAAT ATTCTGAAGC AGGGGCGCGG CATCTCCATA
GGTAGCGAAA CGTCTGGCGG CGTGAATAAC GTGCTGGTTG AAAATAACCA GTTTGAAGGC
TCTATGTACG GTATCCGCAT TAAAACCCTA CGTGGTAAAG GCGGCGAAGT GAAAAACATC
ACCTACCGTA ATACCAAAAT GGTGGATGTT GAAATACCGC TGGTCTTTGC TGCGTACTAC
AAAGCTGCGC CGATTGTGCA GGCTGAGGTA GATAAGATGT TGGCCGAAGG TGGCTTCACG
ATGGGCGAGC AGATTTACCC ACCGGATACC GATCCAGAGC AGCCGTTCGA TCAGTACAAG
ACACCGCATT TCAGCAACGT GACGATCGAG AATTTGGAAT CGACCGGGAA GACCAAAGCC
GCAGCGTACA TTATAGGCGT ACCGGAAGCC CCGCTCAGTG GTTTCCACTT TGATAACGTG
CGCATTGATG CGGATAAAGG TATCCGCATA AGGAATGCGG AACTGCAAAC CAAAGGACTG
ACGCTGAATG TGAAAGAAGG TCCAGTGATG CAGTTGGATA AAGGGGCGAA AGTCGATCAG
TAA
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| Protein sequence | MRSGLALSLM ASCITLGIQA GTAQAASSVK FPDKTCDVTQ YGAEGHRLQI ALNTEAFQKA
IDDCAAAGGG TVHVPRGNYL VDPLFLKSNI RLDLAKDATI VASTEVAAYR ATEKTKYAEA
ENGWLPFISI ADAQNVAITG EGTIDGQGAV WWERWRENIR ATGKKGGTDR PRLIYIKSSS
NVLVDSVTLT HSPSFHIVMR YSHDVDVNGT RILSPWHAPN TDAIDPIDSQ NIRITNNYID
CNDDHIAIKA EKPDSRFPNG VVDNIYIANN ILKQGRGISI GSETSGGVNN VLVENNQFEG
SMYGIRIKTL RGKGGEVKNI TYRNTKMVDV EIPLVFAAYY KAAPIVQAEV DKMLAEGGFT
MGEQIYPPDT DPEQPFDQYK TPHFSNVTIE NLESTGKTKA AAYIIGVPEA PLSGFHFDNV
RIDADKGIRI RNAELQTKGL TLNVKEGPVM QLDKGAKVDQ
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