Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3208 |
Symbol | |
ID | 8531623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3496409 |
End bp | 3499096 |
Gene Length | 2688 bp |
Protein Length | 895 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | phosphotransfer intermediate protein in two-component regulatory system with RcsBC |
Protein accession | YP_003260557 |
Protein GI | 261822451 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGCCA TGATCTTGCG TTATTTTTCC CTCCTTACGG TGTTATCGTT CCTTATTACT GGAACGTTTG GCTATAGCTA CATCAACGAT TTGCTGGCGG ACAAAAAACA TTCGCTGACG ACTATTGCCC AAGGTATACA GAAACGCATC GATACTTACC GTTTTTTCAC CTATCAAATT TACGGCAGTC TGAACAGTGA ACCGTCCGCT AGCGATGCCA ACATTAGCGC AATTAATTTA ATGCCCAATG TTTTCTATGT AGAAAAAAAT GGTCAGAAAA CGGATGCGTT GATTTTTGGG CAACACGATA AAGGGACGCT GACGTCGGTG CGTCGGATAT CACGCTATCT CGATATTCTC TGGGGAGCAG AGAATAACGT CTATTCCATG TATTATCTGA ATGGCATCGA CAACAGTCTG ACGATGATTT CCACACAGAC GCTGAAAGAT ATCTCTTCGC AGTTCCGCGG CAATTATATT ACGGTCATTG CCGAAGCCCG CCGGACGGAA ATGCTGCAAC AGGCAAATGT ATTAGATGAA CGCGAAAGTT TTTCCCCGCT GCGTAAATTA CGCTTCTATA ACGATTACTA TTTCACGCTG CGCACCACAT TCAATCAGCC GGGCCATCTG GCGACAATTC TGGCGTTCGA TCTGCCCATT AACGACTTAA TTCCAGACAC AATCCCGCGT GACCATCTGA TGCTGAAGCC AGATACACCT GCGGCTAGCA ACATCGACGG CAGTAATAAT GGTGAAAGCG CAACGGATGC ACAGCTTCAT GGTTCTAATA TTGAAGTCTC TGCCACGCTC GTAAATGCAC CGATAAAAAT CGTTTTCCAG GTGCCAGTAA AGGCACTGAT TATTGATGCG TTGCGTAATA ACATCTGGCT TATGCTGCTG AATCTGGTTC TGCTGAGTTC GTCCATCAGT GGCTTTTATC TTTTCCGGCG AAAGTATGCC CATCCCGGTG AAGATTTATC GCATCAGTTG GAAAAGAAAC TGGATATTTA CCGCGAAACC ACGGGGAAAA TCCCGATGGG CGTGCTGGTT TATGATTTCA ACAGCAACAA GATCATCATA CAAAATGAGC GTGCAGAGCA CCTGCTTCCA CACCTGAGTC TGCAAAAAAT CACCAATATG GCGGACGAGC ATCAGGGTGT CATTCAGGTC ACCATCAATA ATGAAATGTA TGAAATTCGT CAAATCCGTA GCCAATATTC GCCAGACTAT TGCCTCTTCC TGGTGCGCGA ACAGGATAAA GAAATTCTGG TGCAGCGGAA ATTGCTGCTA GCCCAGCGTG AATACGAAAA GAATATCCAT GCCAGAAAAC GTTTATTCCA AAACCTGCTC AGCGAATTTA AACAGCCGCT GCTCTCACTA CAACAGCATA TTCACGCGAT ACGCCACAGC AATACGGCAG CCATGCAAGC ACAAACGCTG GATCAACTAA CAGCAGATAC CCGCTGCGCG ATTCAGCTAC TGGAAAATAT CGCCCTGCAT GAAAAGCTTG AGGCGCAGGA ATGGACGGGA GTCAACACCA GTTTTTCACC GCTGACACTT ATCGACAATG TTCTCCTTGA GTTGTTGCCA CGATTGAATC AAAAAGGGCT TACCCTATTC CATCATTACC ATCTGGATAA TAATCAAACT TATGTGGGTG ATGCCGAGCT GTTGAAAAAG ATGCTGGCAC TGCTGCTAAA TTATTCAGTG ACCAATACCG ATTACGGCAA AATTACGGTA TCGGTTGACA GAAAAAATAA TGAGTCGGAT ACGCTGGTTA TTCAGGTCAG CGATACCGGA ACCCAGGTTT CAGGCAAAGA GCAGGAAAAC ATTCGACATC CTTTCCTGCA TCCTGCGGCT TTCGATCGTT TCGGACAAAA TTCAGGATTG ACCTTATTTT TGTGTAATCA ACTCTGTAAT AAACTGGGCG GTGCGTTAGC CATCAACAGT AAATCTGGGT TAGGCACACA CTATATTCTG ACGTTAAAAC TGGAGGCGGA AGCGCTGCCC GTTGAGGACG AAAAACTGCT GGATGGGATT ACCGTTCTGC TGGATGTGAC GTCTGACGAA GTACAGCATA TTGTCGGCAA TATGCTGACG GGCTGGGGAG CAAATTATCT GGTCAGCGAT GAGCGTCAGA TTACTCAGGA AGCCGATATT TTTATTACTG ATGACCCGGA GAAAAAAGCA GATTATACGC TGCTATTGAG TCATGACGAT GACACGCTAA CGCCTTTGGG CCCGCGCCGT TTGCGGGTGA ACTATAATAT CAGCCACCTC CTACTGGAGG CATTGCTTAA GCTGATTGAA CTGCAACTGG AAACACCACC CGATGCGACG CAGGAGGGAG AACAGAACGA TGTCGAATTT TACGCCGCAC AATTGGCGTC AAGCGACTAT TATTCGCTGT TCGTGGAGAC AGTACCGGAT GATTTAAAGA GGCTGTATAC TGAAGCGGAA GCAGGCGATT TTCCGTCACT TTCGCAGACG GCGCACCGGC TGAAAGGCGT GTTTGCCATG CTGAATCTGC ATCCTGGCAA ACAGTTGTGT GAACAGCTTG AACAGCATAT TACCGCGCAC GATAGTATAC AGATTGAGGC TAACCTTCAT GAAATTGAAA GGTTTGTCAG TGCATTACTA TCCCCAAGCG AACCTAAAGG GCAGCAAGGT AGCCAACAAG ATGAGTAA
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Protein sequence | MPAMILRYFS LLTVLSFLIT GTFGYSYIND LLADKKHSLT TIAQGIQKRI DTYRFFTYQI YGSLNSEPSA SDANISAINL MPNVFYVEKN GQKTDALIFG QHDKGTLTSV RRISRYLDIL WGAENNVYSM YYLNGIDNSL TMISTQTLKD ISSQFRGNYI TVIAEARRTE MLQQANVLDE RESFSPLRKL RFYNDYYFTL RTTFNQPGHL ATILAFDLPI NDLIPDTIPR DHLMLKPDTP AASNIDGSNN GESATDAQLH GSNIEVSATL VNAPIKIVFQ VPVKALIIDA LRNNIWLMLL NLVLLSSSIS GFYLFRRKYA HPGEDLSHQL EKKLDIYRET TGKIPMGVLV YDFNSNKIII QNERAEHLLP HLSLQKITNM ADEHQGVIQV TINNEMYEIR QIRSQYSPDY CLFLVREQDK EILVQRKLLL AQREYEKNIH ARKRLFQNLL SEFKQPLLSL QQHIHAIRHS NTAAMQAQTL DQLTADTRCA IQLLENIALH EKLEAQEWTG VNTSFSPLTL IDNVLLELLP RLNQKGLTLF HHYHLDNNQT YVGDAELLKK MLALLLNYSV TNTDYGKITV SVDRKNNESD TLVIQVSDTG TQVSGKEQEN IRHPFLHPAA FDRFGQNSGL TLFLCNQLCN KLGGALAINS KSGLGTHYIL TLKLEAEALP VEDEKLLDGI TVLLDVTSDE VQHIVGNMLT GWGANYLVSD ERQITQEADI FITDDPEKKA DYTLLLSHDD DTLTPLGPRR LRVNYNISHL LLEALLKLIE LQLETPPDAT QEGEQNDVEF YAAQLASSDY YSLFVETVPD DLKRLYTEAE AGDFPSLSQT AHRLKGVFAM LNLHPGKQLC EQLEQHITAH DSIQIEANLH EIERFVSALL SPSEPKGQQG SQQDE
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