Gene Pecwa_3205 details

Gene Information

• Locus tag: Pecwa_3205
• ID: 8531620
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3493540
• End bp: 3494301
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 52%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003260554
• Protein GI: 261822448

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAACGG CAAATAACAC AATACTCATT ACAGGAGGAG GTTCCGGCAT TGGCCGCGAG 
CTCGCACTGC GTTTTCACGA TCTCGGCAAC ACAGTCATTG TGACGGGTCG GCGAGCATCT 
CTCCTGCAGG AGACGATCGA TGGACGGCAA AATATGCACG CATTTGAATT AGATATCGAC 
GATCCAAAGG CTATTAATGC GTTTGCACAG CGGATCGTGA CGGAATATCC ATCCCTCAAC 
GTCCTGATTA ACAATGCTGG CATCATGCGT TACGAAGATC TGAGTACTAG AAGCGATCTG 
TGCGATGCGC AGGCGCAGAT TACTACAAAT GTGCTTGGGC CTATCCGCCT CACTAACGCC 
TTTATCGATC ATCTGAAGAG CCAACAGAAT TCTGCGATCG TCAATGTGTC TTCCGGTCTG 
GCTTTTGTTC CGCGTGCTGA CGCGGCGGTT TATAGCGCGA CTAAGGCTGC CGTTCACTTC 
TACACCGTGT CATTGCGGCA TCAGCTCGTG GATCAGGTCG AGGTCATCGA GCTCGTACCA 
CCAGGTATCC AGACTGAGCT TACGCCGGGG CAGTCGGATC GCGAAGGTTA CATGCCTCTG 
AACGCATATA TTGATGAAGT TATTACACTG TTTTGCAAGC AACCGACGCC AAACGAGATC 
GTTGTAGAGC GTGCTCAACT GCAACGTTTG GCTGAGCGTG AAGGGCGTTT CGAACAGGTA 
TTTGATTTGA TCAACGCACG GGCAACTGAG CAGCGGCGCT AG 

 

Protein sequence

MQTANNTILI TGGGSGIGRE LALRFHDLGN TVIVTGRRAS LLQETIDGRQ NMHAFELDID 
DPKAINAFAQ RIVTEYPSLN VLINNAGIMR YEDLSTRSDL CDAQAQITTN VLGPIRLTNA 
FIDHLKSQQN SAIVNVSSGL AFVPRADAAV YSATKAAVHF YTVSLRHQLV DQVEVIELVP 
PGIQTELTPG QSDREGYMPL NAYIDEVITL FCKQPTPNEI VVERAQLQRL AEREGRFEQV 
FDLINARATE QRR