| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3193 |
|---|
| Symbol | |
|---|
| ID | 8531608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 3479400 |
|---|
| End bp | 3479993 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 |
|---|
| Protein accession | YP_003260542 |
|---|
| Protein GI | 261822436 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.194164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTTCTGG GATTATGCAG CGCACGCGCT TTCGCCGCTG ACACATTATT AATTCTGGGC
GATAGCCTCA GTGCGGGCTA CCAGATGCCG GCCGCTAACG CATGGCCAAC GCTGCTGAAC
ACACAGTGGC AAACGCAAAA AAAGGGTATC GCCGTGGTTA ACGCCAGCAT TAGTGGTGAC
ACCACCGCAC AGGGGCTGGT GCGACTTCCT AACCTGCTGA AACAGCATCA GCCACGCTGG
GTGTTGATTG AGCTAGGCGG CAATGACGGA CTTCGGGGAT TTCCGGCACA AAATATCGAG
CAGGATCTGG CGAAAATCAT CACGCTGGTC AAACAGGCTA ACGCTCAACC GCTGCTGATG
CAGGTTCGTT TGCCGACCAA CTATGGCCGC CGCTACACCG AGTCATTCAG CAATATCTAC
CCCAAACTGG CAGAGCAGTT TACGCTTCCT CTTCTGCCTT TCTTTATGGA GCAAGTGTAT
CTTAAACCGG AGTGGATGAT GGAAGATGGC ATCCATCCAA CCCGTGATGC CCAACCGTTT
ATCGCAGAAT GGATGGCGAA GCAGTTGGAG CCCTTAGTTA ACCATGAGTC TTGA
|
|---|
| Protein sequence | MLLGLCSARA FAADTLLILG DSLSAGYQMP AANAWPTLLN TQWQTQKKGI AVVNASISGD
TTAQGLVRLP NLLKQHQPRW VLIELGGNDG LRGFPAQNIE QDLAKIITLV KQANAQPLLM
QVRLPTNYGR RYTESFSNIY PKLAEQFTLP LLPFFMEQVY LKPEWMMEDG IHPTRDAQPF
IAEWMAKQLE PLVNHES
|
|---|
| |