Gene Pecwa_3192 details

Gene Information

• Locus tag: Pecwa_3192
• ID: 8531607
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3478656
• End bp: 3479387
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 55%
• Product: ABC transporter related protein
• Protein accession: YP_003260541
• Protein GI: 261822435

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.110755
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGCGA AGACCAGCCC AGCGAGTGCT ACGCCAAGCA AAACTGCGCA CGTAGAAAAC 
ATTCTTGAAG TTCATCATCT TAGTAAGCAC GTTGGTCAAG GAGAGAATCG GCTTTCCATC 
CTTACCGGAG TTGAGCTTAT TGTCAAACCT GCGCAGACAA TTGCCCTGAT TGGTGAATCG 
GGTTCGGGGA AATCAACGTT GCTGGGGATC CTGGCCGGGC TGGATGATGG CACCGAAGGC 
GATGTTAGCC TGATGGGCAA ATCGCTCAAT ACTCTGGACG AAGAAGGTCG TGCTGCGCTG 
CGTGCCCAGC ATGTCGGTTT TGTTTTTCAG TCTTTCATGC TGGTGCCGAC GCTGAATGCG 
CTGGAGAACG TGCAATTACC CGCGCTGTTG CGCGGCGAAA GCGATAGCCA CAGCCGTGGG 
CAGGCCGAGC AACTTCTGCA ACAGCTTGGG TTGGGTGAGC GCTTACACCA TCTTCCCGCC 
CAACTTTCCG GCGGTGAACA GCAGCGTGTA GCGTTGGCGC GCGCGTTTAG CGGCCGCCCT 
AACGTGTTGT TTGCCGATGA GCCAACTGGG AATCTGGATC GTAAAACTGG TGAACGCATC 
GTTGATTTAC TGTTTTCCCT CAATCGCGAT TATGCCACCA CGTTGATTTT GGTGACGCAC 
GATGAGCAAC TGGCGGCACG CTGTGAGCGA CGTTTGCGGT TAGTTGATGG CACATTGCGG 
GAGGACGCAT GA 

 

Protein sequence

MFAKTSPASA TPSKTAHVEN ILEVHHLSKH VGQGENRLSI LTGVELIVKP AQTIALIGES 
GSGKSTLLGI LAGLDDGTEG DVSLMGKSLN TLDEEGRAAL RAQHVGFVFQ SFMLVPTLNA 
LENVQLPALL RGESDSHSRG QAEQLLQQLG LGERLHHLPA QLSGGEQQRV ALARAFSGRP 
NVLFADEPTG NLDRKTGERI VDLLFSLNRD YATTLILVTH DEQLAARCER RLRLVDGTLR 
EDA