Gene Pecwa_3189 details

Gene Information

• Locus tag: Pecwa_3189
• ID: 8531604
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3472634
• End bp: 3474820
• Gene Length: 2187 bp
• Protein Length: 728 aa
• Translation table: 11
• GC content: 41%
• Product: TonB-dependent receptor
• Protein accession: YP_003260538
• Protein GI: 261822432

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGTTA AAGCTTCCAG GGACGGAGGT GATGCAAAAA AAATAAAACG TGAAGACATA 
ACCAGCATAC GAGGAACAAA TAACGCTGAT GTTTTCGGTA ATGAAACATC GTTGCAAATT 
AATAATTCCA GGAATGAAGC CGGAGCGATA GATGTTGGTA TCCGTGGGCT TCAGGGAAAC 
GGGCGCGTTC CTATTGTTAT TGATGGTAGC CTTCAATCAA CAAATACATG GCGAGGATAT 
CAGGGAAGTT CTGACCGGAC TTATATCGAT ATTGACCTGA TAAATTCGAT TGATATAGAG 
AAGGGAGTGT CTAAGGGGAA ATTTTCTGGT GGCGCAATAG GCGGCACCAT CAGGATGAAA 
ACACTGTCCG CAGAAGATAT TGTTCCTGCT GGTGAAAATC TTGGCTTCCT TTTCAAAGCG 
AGTACTTTTA ACAACAATCG TATACCTAAT ATTTCTTCCG ATGACGGAGA GCAATTAAGC 
TATACGCTGT CTAATGGTGT AAAAAATAGT CACTTTAATA ATGGGTCGAC AACCTTTGGT 
TTAGCCTATA TCGATATGGA TTTTGATTTT GTGTTTGCCC ACAGCGATAG GGCTCAGGGA 
AATTATTTTG CAGGTAAGGG AGGGGCTGAC AAATATAAAA AAGAATCTCC CATCTCACCT 
GGTCAGGAAG TCGTCAACAC CAGTTATGAG AGTCATTCAA GCCTACTCAA AACGGGTTTC 
AATCTTAATC CCTACAATAG AGTTGAGTTT AATTTCCGGC GGCATGAACA AAAAGCGGGA 
GAAGTTCTTG CTGCATATTG GTATAAATAC AAAAAAGAAG ATGCGAATGG TCATCAGACG 
GAAAGAATGC CTCAATGGGG TTTAGGTTCA GCATTAGTTA ATACTGCTGC GGCGAATTAT 
ACCTACAAAC CAGATAACCT ATTCGTTGAT ATGGATCTGG GGGTATGGTG GACAAAGGGA 
CGTTTTGAAC AGCGTAACGG AATCTCCGAT AATGTACATG CAGTTAACGC AGGGCAATAT 
TTGCACAGAT TCAGCGACGA GAGAGCAGGC TTCAATCTCG CGAATACATC ATCGCTACCC 
ACTACAGCTA TTGACGTGAC TTATGGATTA GAGTTTATGA CGCAAAGGAT CGTTCCCAGG 
AGCAAGAGAT ATCAGCCTGT CTGGCAGCCG GGGGGAATTA TTCAAGGAGA GGAACTGCTC 
CCTGCGGCTC GAAATTCAAA AGGGGTCAGT AAGTCATTGT TCGTTAACGC TGAGTATAAC 
GGCGATGTCA TTTCGATATT GACAGGGTGG CGGGGGCATG ATTTTGAAGC AAACGATCTT 
AATGAACATA AAAAAATAAA CTATTCGGCC AAAAATGATT TTTTCGGTAC GCTAACTTAT 
CACCTGTCAC GAAATATTGA TATTTACACT AAATACTCTG ACGCTTACAG AAATCCCAGT 
TTATTTGAAA GTTCGTCGTC AGGACAAACC TTCTCCTATA GTCCTAAGTT CCCGCTAAAG 
TCTGAGCATG CCAAGTCACT AGAGTTAGGT GTGGAAATAA AAAAGAAAAA TCTGTTGGTA 
ACAGAAGATT CGGCTTCTCT TAGAATGGCT TATTTCAATA ACAATATTAA GGACTATTTA 
TCTCAGGGCG TTAATCCTAA CAAGGAAACT GATACGGAGT CCTATATCAT TATGAAAAAC 
TATGACAGTT TTAAACTTTC CGGATATGAA ATAGAAGCTA GTTACGACTC AAAATATGTA 
TTTGGTCGTA TAGATACCAC GTTGTATAAC GCAACTGAAC TCTGTTCAAG ACATGAAATG 
ATATTGAACG AACTGTCGTC TCCCTGTAAT TCAGTTGGGT TTAACTGGAG TTTGTCACCA 
TCAAGGATTC CTCCGAAAAA GAATCTGTCT ACTTCCGTGG GGATCAAGTT GTTTGACCAG 
CGGCTACAAT TAGGAACTCG GGTTCGTTAT AACTCAGGGA AAGAGTATCC GACAAGTTGG 
TTGCAAGGCA CTGCTGCTAC ACCTGTTGAA AGACAATACG CCTCTACAAC CATTGATTTG 
TTCGGGAAAT ATAATGTAGA GAAAAATATC AACGTATATT TTAATATTGA TAACTTAACC 
AATCGCTATG CTTTCGATCC TGGCACGGTT ATTTACATGC CTATTCCAGG TAGGACATTT 
AGGTTAGGCG TAGAAGCTAA ATTCTAA 

 

Protein sequence

MIVKASRDGG DAKKIKREDI TSIRGTNNAD VFGNETSLQI NNSRNEAGAI DVGIRGLQGN 
GRVPIVIDGS LQSTNTWRGY QGSSDRTYID IDLINSIDIE KGVSKGKFSG GAIGGTIRMK 
TLSAEDIVPA GENLGFLFKA STFNNNRIPN ISSDDGEQLS YTLSNGVKNS HFNNGSTTFG 
LAYIDMDFDF VFAHSDRAQG NYFAGKGGAD KYKKESPISP GQEVVNTSYE SHSSLLKTGF 
NLNPYNRVEF NFRRHEQKAG EVLAAYWYKY KKEDANGHQT ERMPQWGLGS ALVNTAAANY 
TYKPDNLFVD MDLGVWWTKG RFEQRNGISD NVHAVNAGQY LHRFSDERAG FNLANTSSLP 
TTAIDVTYGL EFMTQRIVPR SKRYQPVWQP GGIIQGEELL PAARNSKGVS KSLFVNAEYN 
GDVISILTGW RGHDFEANDL NEHKKINYSA KNDFFGTLTY HLSRNIDIYT KYSDAYRNPS 
LFESSSSGQT FSYSPKFPLK SEHAKSLELG VEIKKKNLLV TEDSASLRMA YFNNNIKDYL 
SQGVNPNKET DTESYIIMKN YDSFKLSGYE IEASYDSKYV FGRIDTTLYN ATELCSRHEM 
ILNELSSPCN SVGFNWSLSP SRIPPKKNLS TSVGIKLFDQ RLQLGTRVRY NSGKEYPTSW 
LQGTAATPVE RQYASTTIDL FGKYNVEKNI NVYFNIDNLT NRYAFDPGTV IYMPIPGRTF 
RLGVEAKF