Gene Pecwa_3170 details

Gene Information

• Locus tag: Pecwa_3170
• ID: 8531585
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3452780
• End bp: 3453427
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 55%
• Product: 3-oxoacid CoA-transferase, B subunit
• Protein accession: YP_003260519
• Protein GI: 261822413

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGCGA AAGAATTAAT CGCCCGCCGC GTCGCACTGG AACTGAAAAA CGGCGACGTG 
GTGAATTTAG GCATTGGCTT ACCCACCAAA GTGGCGAATT ACGTGCCGCA TGGCATCGAA 
GTCACTTTCC AATCGGAGAA CGGCTTTTTG GGGCTCGGTG CGGTTACCGA GCCGGATGGC 
AATCTGGTTA ACGCCGGGGG GCAAGCATGC GGCATGGTGC CGGGTGCGGC AATGTTCGAC 
AGCGCTTTTT CTTTTGCGCT GATTCGCGGC GGCCATGTCG ATGTTTGCGT ACTGGGCGGC 
TTGCAGGTCG ATGAACACGG CAGCCTCGCC AACTGGATGG TACCGGGAAA AATGGTGCCA 
GGCATGGGCG GCGCGATGGA TCTGGTTGTC GGGGCGAAGA AGGTCATCAT CGCCCTTGAG 
CACTGCGCCA AAAATGGCGA TGCAAAACTA TTGCATCAAT GCACCTACCC GCTAACCGCC 
GCCAATAAAG TCAGCATGGT CGTCACCGAG TTAGCCGTCT TCCAGTTTAT CGATAGACAA 
ATGGTGCTGA CTGAAATCAG CCCTGATATC ACCGTGGACG AACTGCGCCA AAAAACCGAG 
GCGAATTTCA TCGTGTCCGC CGATGTAAAA CCCTTCAGCA TTCATTAA 

 

Protein sequence

MDAKELIARR VALELKNGDV VNLGIGLPTK VANYVPHGIE VTFQSENGFL GLGAVTEPDG 
NLVNAGGQAC GMVPGAAMFD SAFSFALIRG GHVDVCVLGG LQVDEHGSLA NWMVPGKMVP 
GMGGAMDLVV GAKKVIIALE HCAKNGDAKL LHQCTYPLTA ANKVSMVVTE LAVFQFIDRQ 
MVLTEISPDI TVDELRQKTE ANFIVSADVK PFSIH