Gene Pecwa_3141 details

Gene Information

• Locus tag: Pecwa_3141
• ID: 8531556
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3426089
• End bp: 3426763
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 49%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003260490
• Protein GI: 261822384

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATGAAT TTGACTGGAG CTCAATTGGG CCAAGTATGC CGTACCTGAT TCAGGGGATG 
GTCGTCACAC TCGAAATTAC GCTGACGGCG GTAGTATTCG GGATTGTCTG GGGTACGATC 
CTCGCGGTGA TGCGTCTGTC GCCGATAAAA CCCATCAGTT GGTTCGCCAA ACTGTATGTG 
AACCTGTTCC GCTCCGTTCC ACTGGTCATG GTACTACTGT GGTTTTATCT GGTGGTTCCT 
AGCTTATTAC AAAATGTGCT TGGGCTATCG CCGAAAACCG ATATTCGACT GATTTCAGCT 
ATGGTAGCCT TCTCGCTGTT CGAGGCAGCC TACTATTCGG AAATCATTCG TGCGGGTATC 
CTCAGCGTAT CGCGCGGTCA ATCTTCCGCA GCGTTAGCAT TAGGAATGAC GCACTGGCAA 
TCCATGAAGC TGGTTATTTT ACCACAGGCA TTCCGTGCCA TGGTGCCGCT GTTGCTGACA 
CAAGGTATCG TCCTGTTTCA GGATACCTCA CTGGTTTATG TACTCAGCCT CGCTGATTTC 
TTCCGTACCG CCTCAACCAT CGGAGAGCGC GACGGGACAC AAGTTGAAAT GATCCTGTTT 
GCTGGATTCA TTTATTTTCT CTTCAGCATT ACTGCCTCAA TGCTGGTCAG TTACCTGAAA 
AAAAGGACGG TTTGA 

 

Protein sequence

MYEFDWSSIG PSMPYLIQGM VVTLEITLTA VVFGIVWGTI LAVMRLSPIK PISWFAKLYV 
NLFRSVPLVM VLLWFYLVVP SLLQNVLGLS PKTDIRLISA MVAFSLFEAA YYSEIIRAGI 
LSVSRGQSSA ALALGMTHWQ SMKLVILPQA FRAMVPLLLT QGIVLFQDTS LVYVLSLADF 
FRTASTIGER DGTQVEMILF AGFIYFLFSI TASMLVSYLK KRTV