Gene Pecwa_3140 details

Gene Information

• Locus tag: Pecwa_3140
• ID: 8531555
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3425345
• End bp: 3426085
• Gene Length: 741 bp
• Protein Length: 246 aa
• Translation table: 11
• GC content: 51%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003260489
• Protein GI: 261822383

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAATAG ATTGGAACTG GGGCATATTT TTACAAGCCG CCCCCTTCGG CAACACAACC 
TACCTCGGGT GGATTTTGTC CGGTCTGCAA GTCACCGTCA CACTATCCAT TTGTGCCTGG 
ATTATCGCTT TTCTGATTGG TTCTTTATTT GGAATCCTAC GTACCGTCCC GAACCGTTTT 
CTTTCAAGCA TTGGTACTTG CTACGTCGAA CTATTTCGCA ACGTCCCGCT TATCGTCCAG 
TTCTTTACCT GGTATCTGGT GGTTCCCGAG CTGCTTCCCG TCAACATCGG TATGTGGTTT 
AAAGCCGAGC TAGACCCTAA TATTCAGTTC TTTCTGTCAT CGATGATTTG TCTGGGGCTC 
TTCACCGCAG CGCGCGTTTG TGAGCAGGTG CGCGCAGGGA TTCAATCGCT ACCACGCGGG 
CAGAAAGCTG CCGGGTTGGC GATGGGTCTG ACGCTACCGC AAACCTATCG CTATGTGTTA 
CTGCCGAATG CGTATCGCGT GATCGTTCCA CCGCTGACGT CAGAAATGCT GAACCTGGTA 
AAAAACTCGG CGATAGCTTC CACAATTGGT CTGGTTGATA TGGCGGCACA GGCAGGGAAG 
CTGCTGGACT ATTCAGCCCA CGCCTATGAA TCCTTTACCG CCATCACACT AGCGTATGTT 
GGCATCAACG CCATTATTAT GTTGATCATG CAGGTCGTTG AGCGAAAAAC CCGTTTGCCG 
GGCAATATGG GGAGCAAATA A 

 

Protein sequence

MSIDWNWGIF LQAAPFGNTT YLGWILSGLQ VTVTLSICAW IIAFLIGSLF GILRTVPNRF 
LSSIGTCYVE LFRNVPLIVQ FFTWYLVVPE LLPVNIGMWF KAELDPNIQF FLSSMICLGL 
FTAARVCEQV RAGIQSLPRG QKAAGLAMGL TLPQTYRYVL LPNAYRVIVP PLTSEMLNLV 
KNSAIASTIG LVDMAAQAGK LLDYSAHAYE SFTAITLAYV GINAIIMLIM QVVERKTRLP 
GNMGSK