Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3130 |
Symbol | |
ID | 8531539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3411530 |
End bp | 3412753 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | ROK family protein |
Protein accession | YP_003260479 |
Protein GI | 261822373 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.224994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAG GCGGACAGGC GCAGATAGGG AATGTCGATC TGGTTAAGCA ATTAAACAGC GCGGTGGTTT ACCGCCTGAT TGATCAGCAA GGCCCGATCT CACGGATTCA GATAGCAGAG CAGAGCCAAC TTGCTCCCGC CAGCGTCACC AAAATCACCC GCCAACTTCT GGAGCGCGGG CTCATCAAAG AAGTTGATCA GCAGGCTTCC ACCGGTGGCA GACGCGCCAT TTCGATTATC ACCGAAAATC GCCCTTTCCA TAGCATAGCC GTTCGTCTCG GTCGTTATGA CGCCACCATT GCGCTGTACG ATTTACAGGG AAAAGCACTG GAAGAAGCGC ACTACGAACT ACAAGAAAAC ACGCAGGAGA CATTGGAAAC CGCGCTTTTT CAAGCGCTCA ATAGTTTTAT CACCAACCAC CAGCGCCGCA TTCGCGAGCT TATTGCGATC TCTGTGGTGC TGCCGGGGTT GGTTGATCCC GTTGCGGGTA TTGTCCGCTA TATGCCGCAC ATCAGCGTGG ATAACTGGCA ACTGGTCGAA AACCTGCAAC GCCACTTCAA CGTCACCAGC TTTGTCGGTC ACGACATCCG CAGTCTGGCG TTGGCAGAAC ACTACTTTGG CGCAACCCAC GACTCGCTAG ATTCTATTCT GGTACGTGTC CACCGGGGTA CAGGCGCAGG GATTCTCGTC AACGGGCAAA TTTTTCTTGG CAGCAACGGC AACGTGGGTG AGATCGGTCA TATTCAGATC GATCCGCTCG GCGATCGTTG CCACTGTGGT AATTTCGGCT GTCTGGAAAC CGTCGTCGCC AACAGTGCGA TTGAACAACG TGTACAGCAT CTGCTGCGCC AAGGTTACCC CAGCAAACTT TCTGCAGATA ACGCAACGAT TTCTGCGATT TGCAAAGCGG CGAATCGAGG CGATGCGCTC GCCCGTGAGG TCATCGAACA GGCCGGGCTT AACCTCGGTA AAGCGCTTTC CATCGCGATC AACCTGTTCA ACCCTCAGAA AGTCGTGATT GCTGGTGAAA TCACCGCAGC AGAAAAAACA CTACTTCCTG CCATCCAGCG CTGTATCAAT TCTCAGGTGC TGAAGGAATT CCGTCATAAT CTGCCGATTG AGATCTCAAG CCTTAACCAT CTTTCCGCTA TCAGCGCCTT CGCCTTGGTC AAACGTGCGA TGCTAAACGG TGTTCTGCTA CAGCAATTGC TCGAAAACGC CTGA
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Protein sequence | MTTGGQAQIG NVDLVKQLNS AVVYRLIDQQ GPISRIQIAE QSQLAPASVT KITRQLLERG LIKEVDQQAS TGGRRAISII TENRPFHSIA VRLGRYDATI ALYDLQGKAL EEAHYELQEN TQETLETALF QALNSFITNH QRRIRELIAI SVVLPGLVDP VAGIVRYMPH ISVDNWQLVE NLQRHFNVTS FVGHDIRSLA LAEHYFGATH DSLDSILVRV HRGTGAGILV NGQIFLGSNG NVGEIGHIQI DPLGDRCHCG NFGCLETVVA NSAIEQRVQH LLRQGYPSKL SADNATISAI CKAANRGDAL AREVIEQAGL NLGKALSIAI NLFNPQKVVI AGEITAAEKT LLPAIQRCIN SQVLKEFRHN LPIEISSLNH LSAISAFALV KRAMLNGVLL QQLLENA
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