| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3113 |
|---|
| Symbol | |
|---|
| ID | 8531522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3392659 |
|---|
| End bp | 3393618 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function DUF1722 |
|---|
| Protein accession | YP_003260462 |
|---|
| Protein GI | 261822356 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.892265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCG AACTCATCCC TGTTGGTATC AGCGCCTGTC TGCTCGGTAA TCCCGTGCGG
TTTGATGGTG GACACAAGCG TCTGACGTTT GCCGCTGAAC AACTGGCGCC CTATTTTCGT
TTTGAGCCGG TCTGCCCGGA AATGGCGATT GGTTTACCGG TGCCGCGTCC TGCGCTCAGG
CTGGTGCGCG AAGGGGAGAG CCACATCACA CTACGCGCCA GTAATGGCTC GCCTCTGGAT
GTCACCCAGC AAATGACGGT GTTTTCCGCT GACAAAGTGA GCGGACTTCA GCACTTATGC
GGGTATATCG TCTGCGCTAA ATCACCAAGT TGTGGCATGG AGCGCGTGAA GGTTTACGAT
GAAGCGCAAA AGGATGCGCG TAAAAGCGGA ATCGGCCTGT TTACGCAGGA GTTGATGCGG
CAAATGCCCT GGTTGCCGGT TGAGGAAGAT GGACGCCTGC AAGATCTTGG CTTGCGGGAA
AATTTCATTG AACGCGTTTA TGCGCTGCAC GAACTGAATC AGCTATGGCA AAACGGGCTG
AGCCGTGGCG CGCTTATTGC CTTTCATAGC CGCTATAAAT TACTGCTGTT GGCGCACTCC
CAACCGGAAT ACCGCGAGCT GGGGCCGTTT GTTGCGGGGA TCGATAAGTG GGAATCGCTG
GAAGACTATA TTGTTGAATA CCGGATAAGG TTGATGAAAC TGCTATCGAC GCCAGCGACG
CGACGCAATC ACACCAATGT GCTGATGCAT GTGCAGGGGT ACTTCCGACG CCAGCTAAAT
TCTCAACAGC GACAGGAACT GGCGCAGCTT ATCGATCGCT ATCGACAGGG TTTGCAGCCG
CTATTGGCAC CTATCACATT GCTAAAACAT TATATGGCGG AATACCCCGA TGCGTATCTG
GCCCAGCAGC GTTACTTTGA GCCGTACCCG GAAGCATTGC GCCTGCGTTA TGGACACTAA
|
|---|
| Protein sequence | MTLELIPVGI SACLLGNPVR FDGGHKRLTF AAEQLAPYFR FEPVCPEMAI GLPVPRPALR
LVREGESHIT LRASNGSPLD VTQQMTVFSA DKVSGLQHLC GYIVCAKSPS CGMERVKVYD
EAQKDARKSG IGLFTQELMR QMPWLPVEED GRLQDLGLRE NFIERVYALH ELNQLWQNGL
SRGALIAFHS RYKLLLLAHS QPEYRELGPF VAGIDKWESL EDYIVEYRIR LMKLLSTPAT
RRNHTNVLMH VQGYFRRQLN SQQRQELAQL IDRYRQGLQP LLAPITLLKH YMAEYPDAYL
AQQRYFEPYP EALRLRYGH
|
|---|
| |