Gene Pecwa_3101 details

Gene Information

• Locus tag: Pecwa_3101
• Symbol: sdhB
• ID: 8531510
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3381169
• End bp: 3381885
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 51%
• Product: succinate dehydrogenase iron-sulfur subunit
• Protein accession: YP_003260450
• Protein GI: 261822344

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCG AATTTTCCAT TTATCGTTAC AACCCGGATG TTGACGATGC GCCGCGGATG 
CAGGATTACC AGTTGGAGGC GGAAGAAGGC CGCGACATGA TGCTGCTGGA TGCGCTGATG 
CTGCTGAAAG AACAAGATCC AACGCTTTCA TTCCGTCGCT CCTGCCGTGA AGGTGTCTGT 
GGCTCCGACG GCGTTAACAT GAACGGCAAA AATGGCTTGG CCTGTATTAC GCCGGTTTCC 
GCGTTACAGC GCGGAAAGAG CAAAATTGTT ATCCGTCCTT TACCGGGATT GCCGGTTGTG 
CGTGATTTGG TAGTGGACAT GGGACAGTTC TATGCTCAAT ATGAGAAAAT AAAGCCTTAC 
CTGTTGAATA ATGGGAAAAA TCCACCAGCG CGTGAGCATC TGCAATCGCC TGAACAACGT 
GCCAAGCTGG ATGGGTTGTA TGAATGTATT ATGTGTGCAT GCTGTTCAAC GTCTTGCCCG 
TCGTTCTGGT GGAACCCAGA TAAGTTTGTT GGGCCTGCGG GGCTGCTGGC TGCGTACCGT 
TTCCTGATTG ACAGTCGTGA TACGGAAACT ACGCCACGGT TGGACGATCT GGACGATGCA 
TTTAGCGTTT TCCGCTGCCA CGGTATCATG AACTGCGTCA GCGTCTGTCC GAAAGGACTG 
AACCCGACTA AGGCTATCGG CCATATTAAA TCGATGTTAC TGCACCGCAG CGCGTAA 

 

Protein sequence

MKLEFSIYRY NPDVDDAPRM QDYQLEAEEG RDMMLLDALM LLKEQDPTLS FRRSCREGVC 
GSDGVNMNGK NGLACITPVS ALQRGKSKIV IRPLPGLPVV RDLVVDMGQF YAQYEKIKPY 
LLNNGKNPPA REHLQSPEQR AKLDGLYECI MCACCSTSCP SFWWNPDKFV GPAGLLAAYR 
FLIDSRDTET TPRLDDLDDA FSVFRCHGIM NCVSVCPKGL NPTKAIGHIK SMLLHRSA