Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3089 |
Symbol | |
ID | 8531498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3367683 |
End bp | 3368108 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | colicin uptake protein TolR |
Protein accession | YP_003260438 |
Protein GI | 261822332 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0178891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGAG TACGCAGAGG CCGTCGCGAG CTGAAATCCG AGATCAACAT TGTTCCGCTA CTGGACGTGC TGTTGGTTCT GTTGCTGATT TTTATGGCGA CAGCACCGAT TATTACGCAG AGCGTTGAGG TTGATCTGCC GGATGCGACC GACTCAAAAA CGGTCTCCAG CAACGACAAT CCGCCCGTGA TCGTAGAGGT TTCAGGCATC GGGCAATATA GCCTGGTTGT TGAGCAAAAC CGTATGGAAC AACTTCCGGC AGAGCAGGTG GTTGCTGAAG CGCAATCACG GCTGGCAACT AACCCCAAGA CGGTATTTTT GATTGGTGGC GCGAAGGATG TTCCTTATGA TGAGATCATT AAAGCGTTGA ATTTGTTGCA TCAGGCCGGC GTAAAATCCG TTGGTTTGAT GACGCAACCG ATTTAA
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Protein sequence | MARVRRGRRE LKSEINIVPL LDVLLVLLLI FMATAPIITQ SVEVDLPDAT DSKTVSSNDN PPVIVEVSGI GQYSLVVEQN RMEQLPAEQV VAEAQSRLAT NPKTVFLIGG AKDVPYDEII KALNLLHQAG VKSVGLMTQP I
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