Gene Pecwa_3084 details

Gene Information

• Locus tag: Pecwa_3084
• ID: 8531491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3362021
• End bp: 3362737
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 49%
• Product: protein of unknown function DUF554
• Protein accession: YP_003260433
• Protein GI: 261822327

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00111761
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGGTC CGTTGATTAA TGGTGCCGCT ATCTTGATTG GTAGTGGGCT GGGCATTGCC 
TTGCGTCGCT TTATTCCCCA ACGTTTGCAG GATGGCCTGC CTCCGGCGTT TGCGATGGTA 
TCGATTGCAA TGGGTATCAC GCTGGTTGTT AAAGTTCAGC AACTACCGGC GGTGGCGCTG 
GCTATCGTGA TTGGTGTTGC GTTAGGAGAA TTGCTACGCA TGGAGTCTGC CGTGCAGCGA 
GCTGGCATGA TGATTCAAAA AGGATTAAAC CGCGTTCTGC CTGCACAGGA ACACCGTTTA 
CCGCAGGATG TGTATACTCA GAATTTTACC GCGCTAATCG TCTTGTTTTG TGCCAGCGGT 
ACTGGTGTGG TTGGGGCGTT GACGGAAGGG TTAACCGGTG ATTATCAACT ACTGATTATC 
AAATCTGCTT TGGATATTTT CACCGCACTG ATTTTTTCCA TCACTCTTGG CCTTGCTGTG 
ATGTCGATTG CGATACCGCA GATGATTGTT CAGGCGCTGT TGTTCTTCTC CGCCAAATTG 
ATTATGCCCT TTATGACAGA TGTCACGATG GGCGATTTTT CTGCCTGTGG CGGGATTATC 
ATGATTGCCG TTGGGTTACG GATTGCGCAG ATAAAATCAT TTGCGGTGGT TAACTTTCTT 
CCCGCTTTGG TTTTGATTAT TCCGCTCTCT CTCTATTGGC ATCGGCTCTT CGCCTAA 

 

Protein sequence

MIGPLINGAA ILIGSGLGIA LRRFIPQRLQ DGLPPAFAMV SIAMGITLVV KVQQLPAVAL 
AIVIGVALGE LLRMESAVQR AGMMIQKGLN RVLPAQEHRL PQDVYTQNFT ALIVLFCASG 
TGVVGALTEG LTGDYQLLII KSALDIFTAL IFSITLGLAV MSIAIPQMIV QALLFFSAKL 
IMPFMTDVTM GDFSACGGII MIAVGLRIAQ IKSFAVVNFL PALVLIIPLS LYWHRLFA