| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3074 |
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| Symbol | |
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| ID | 8531481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 3349894 |
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| End bp | 3351387 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003260424 |
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| Protein GI | 261822318 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA CAGTCATGAG AAAATCACTG ATGTTTAGCC TGATTACGCT GGCTATTCTC
AGCGCGGGTA GCGTGGGCTA TCTGGTGGGT CAGCAGCAAA CACAGCACTC ACCTTCTGCC
GCCGCGCCAG AACGATCCGT GCTCTATTGG TACGACCCAA TGGTGCCAGA TAAGCGGTTC
GACAAACCGG GAAAATCGCC CTTTATGGAT ATGGAATTGG TTCCCCGCTA TGCCGATGAT
GTGCAGGAAG ACGGCGGAGT CACCGTCAGC GCCCGGCAGC AGCAAAATCT TGGCGTCCGC
ACAGCCCGCG CAGAAATGCG CGAACTTGCC GACCACAGCA CAAGTTATGG CACCGTCACG
CTCAACGAAC GCGGATTGCA CACGCTGGTC GCACCTAGTG GTGGTATTGT CGAGAAACTC
ACGGTCAACG CGCTGCAACA ACAGGTGAAG AAAGGCGAGA CGCTAGCCAT ATTGTGGAAC
CCAACCTGGG CAGCGGCACA GCACGAATAT CTGGCGGTAC GGCACCTGGG CGACGAAATG
CTGACCCAAT CGGCTCGCCA GCGCCTGGCG CTGCTCTTCA TGCCGGAAGC GATTATTCTC
CAAGTCGAGC GTAGCGGAAA ACCGCAGGAT AGGATCGCGA TTATCGCACC AGAAGATGGC
TACGTGAATA AACTAGAGGT GCGACAGGGT ATACAGTTGA GCCCTGCTCA GCCGCTATTC
GAGATTGCCA GCCTGAATCC GGTTTGGATT GATGTCGATT ATCCCGAGAC GCAGGCCGCG
CAGTTAACGA TCGGCAGCGA TATCGGTGCC ACCAGCGCCG CCTGGCCGGG TAAAACCTTC
CACGGTAAAA TCAGCGAACT GCTGCCCGTA TTGGATAGCA CCACTCGCAC GTTAAAAGCA
CGCGTCATAC TCGACAATCC GCAGCAGCAA CTTAAACCCG GCATGTATCT GACCGTACAG
CTTTCTCACG CTCAGGCACA GTCGCGTCTG GCGATCCCGC AGGAGGCCTT GTTGGTCAGC
GGTAGCCAAA ATCGTGTCTT GCTAAGCGAC GGTAACGGCC ATTTTACTCC ACGTCACATC
ACTGCAGGCG CATCGATGGG CGACTGGGTG GAAATCATTG ATGGACTGAA AGAAGGCGAC
AATGTGGTCA CCTCCGGTCA GTTCTTGATT GACTCCGAAG CCAGCCTGCG CAGCGCCTTA
CCGCAGTTTG ATGCTGAAGC ATCAACAACA CCTACAGCTC CCGCAGGCTA TCAAACGCAA
GGAGTGATCA AAGCGATAAA CGGCAACCAG ATCACCATTG AGCATGAAGC CGTTCCGGCA
CTCAACTGGT CACCGATGAC GATGGATTTC ACGCTGCCGT CGTCAGGGTT GCCACAGGGT
GTGGGTGTCG GCAGTACCGT CAACGTCCAG TTCACTATAG ATGACAACGG GATTCACATT
CTGCATTTTT TGTCCGCTAA CAACCCGCAT GCCGAACACG GAGGTCATCC ATGA
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| Protein sequence | MSKTVMRKSL MFSLITLAIL SAGSVGYLVG QQQTQHSPSA AAPERSVLYW YDPMVPDKRF
DKPGKSPFMD MELVPRYADD VQEDGGVTVS ARQQQNLGVR TARAEMRELA DHSTSYGTVT
LNERGLHTLV APSGGIVEKL TVNALQQQVK KGETLAILWN PTWAAAQHEY LAVRHLGDEM
LTQSARQRLA LLFMPEAIIL QVERSGKPQD RIAIIAPEDG YVNKLEVRQG IQLSPAQPLF
EIASLNPVWI DVDYPETQAA QLTIGSDIGA TSAAWPGKTF HGKISELLPV LDSTTRTLKA
RVILDNPQQQ LKPGMYLTVQ LSHAQAQSRL AIPQEALLVS GSQNRVLLSD GNGHFTPRHI
TAGASMGDWV EIIDGLKEGD NVVTSGQFLI DSEASLRSAL PQFDAEASTT PTAPAGYQTQ
GVIKAINGNQ ITIEHEAVPA LNWSPMTMDF TLPSSGLPQG VGVGSTVNVQ FTIDDNGIHI
LHFLSANNPH AEHGGHP
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