Gene Pecwa_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_3061 
Symbol 
ID8531468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp3337589 
End bp3338569 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content54% 
IMG OID 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003260411 
Protein GI261822305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATTC AAAAAATAGC ACGGATAGCT GGAGTCTCGG TTGCCACCGT TTCACGGGTG 
TTGAACAACA TTGGTACCGT GAAGCCGCAA AACCGGGAAC GTGTTCTCAA TGCGATAAAA
AGCAGCAATT ATCAGCCGAA CTTACTGGCC CGCCAGCTAC GTACCGCGCG CAGCCAGATG
TTATTGGTCA TGGTTTCCAA CATTGCCAAC CCTTTCTGCG CCGATGTGGT GAAAGGCATT
GAGGCGGAAG CGGAAGAAAA CGGCTACCGC ATTCTGCTGT GCAATTCAGG TGCCGATATC
GTTCGCGCCC ACTCCAGCCT GCAACTGCTG TCCGGTAAAA TGGTCGATGG TGTGATCACC
ATGGACGCTA TTTCGACGCT TTCTGCGCTT CAGGACATGA TTGGCAACGC ACCTTGGGTG
CAGTGCGCCG AGCATGACGA TACGTCTGCC ATTTCATCCG TCGGTATTGA TAACGCAGAG
GCATCCCGTT TTGTGATTAA TCACTTTATT GGCAAAGGCC GCCGCCGTAT CGCCATGATT
AACCACGATA TGAATTACCT CTACGCCCAG CAGCGAGAAA AAGGTTATCG CGACGCGCTC
GCGGAGAATG CGTTTGATTA TGACAGGGTA GAATACGCCA ACGCGTTGAG CTACCAAGGT
GGAAAAGCGG CAATGAACGA GCTACTTAGC GCCCCAGATA GGCCGGATGC CGTCTTTGTG
GTGTCCGATA CGCTGGCCGC AGGCGCATTG TCGGCAATCT GCGAGGCGGG GCTGAGTGCG
CCACAGGATA TTGCCGTCAT CGGTTTCGAC GGCTCGGAGC TGGGTTACAT CACTTCCCCC
CAGCTCAGCA CCATTCAGCA GCCGTCTGCA CATATCGGCA GACAAGCCGT GAAGCTGCTA
TTGCAACAGA TCGACCAACC TGACAGCGCA ACAGAAAAGC GTTTACTGGA ATGGACGTTT
GTCGAACGGG CATCCAGCTA A
 
Protein sequence
MSIQKIARIA GVSVATVSRV LNNIGTVKPQ NRERVLNAIK SSNYQPNLLA RQLRTARSQM 
LLVMVSNIAN PFCADVVKGI EAEAEENGYR ILLCNSGADI VRAHSSLQLL SGKMVDGVIT
MDAISTLSAL QDMIGNAPWV QCAEHDDTSA ISSVGIDNAE ASRFVINHFI GKGRRRIAMI
NHDMNYLYAQ QREKGYRDAL AENAFDYDRV EYANALSYQG GKAAMNELLS APDRPDAVFV
VSDTLAAGAL SAICEAGLSA PQDIAVIGFD GSELGYITSP QLSTIQQPSA HIGRQAVKLL
LQQIDQPDSA TEKRLLEWTF VERASS