Gene Pecwa_3030 details

Gene Information

• Locus tag: Pecwa_3030
• ID: 8531436
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3298434
• End bp: 3299132
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 42%
• Product: pseudaminic acid CMP-transferase
• Protein accession: YP_003260382
• Protein GI: 261822276

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTGG CGATTATTCC TGCTCGTGGT GGCAGTAAAC GTATACCTCG TAAAAATATT 
AAACCGTTTT GTGGTAAGCC GATGATCGCT TGGTCAATTG AGCAAGCGAA AGCGTCAGAG 
TGCTTTGATA GAATAATTGT TTCAACTGAT GACCTCGAAA TTGCAGATAT TGCATGTCAA 
TATGGTGCTG AGATCCCCTT CATGCGCCCC GATGAGCTAT CAAATGATCA CGCAACAACT 
GGACAGGTAA TGAATCATGC AGTCACATGG CTACAGCATG AGTCTATCAT TCAGGCTGCC 
TGCTGCATTT ATGCAACCGC GCCTTTTTTG TCTGCTGAAG ATATTCGTTT TGGCTATAGG 
CGACTCGAAG AGACGCAATC TGATTATACA TTCTCTGTCA CTACCTACGC TTTTCCAATA 
CAGCGTGCGT TAAAGAAAAG TGTGGATGAT TACATCAGTA TGTTTCAACC AGAAGCGTTT 
CAAACGCGTT CTCAGGATCT GGAAGAGGCT TTTCATGATG CTGGCCAGTT TTATTGGGGA 
ACATCACTGG CGTGGAAAGA AGAAAAACCT GTTTTTAATA GCAATTCGAC AGGAATAATA 
CTTCCTCGCC ACCGTGTTCA GGATATTGAT ACACAGGAAG ATTGGTTGAG AGCTGAATTA 
ATGTTTCAGA TTTTACAGCA AAGTTATCAT CGTGGCTAA 

 

Protein sequence

MKVAIIPARG GSKRIPRKNI KPFCGKPMIA WSIEQAKASE CFDRIIVSTD DLEIADIACQ 
YGAEIPFMRP DELSNDHATT GQVMNHAVTW LQHESIIQAA CCIYATAPFL SAEDIRFGYR 
RLEETQSDYT FSVTTYAFPI QRALKKSVDD YISMFQPEAF QTRSQDLEEA FHDAGQFYWG 
TSLAWKEEKP VFNSNSTGII LPRHRVQDID TQEDWLRAEL MFQILQQSYH RG