Gene Pecwa_3011 details

Gene Information

• Locus tag: Pecwa_3011
• ID: 8531417
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3279499
• End bp: 3280281
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 52%
• Product: protein of unknown function DUF1017
• Protein accession: YP_003260364
• Protein GI: 261822258

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00176721
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGGCAC TCAATCGTAT CACGGCTTTG CTGCTGCTGG TTTCCGGCGT TGCGATGTCT 
GCACAGTTGA CGGTGAAATC GCCTCAACAG ACGATCGCCG TTGTTAAACT GGACGACGGC 
ACGCGTCTTG AAAAATTTTA CGAACAGGTT CCTTGGCCAC AGAACATCAA CTGGCAAACG 
GCATTTATTT CTGATTTCGC GACGACGCAG AACGTTCGGG CACAGGGCGA CACGTTGTTG 
CAAAAACTGG CTGAACTGGA AACGCGCTGG CGTAACTCAG GTGATGGTGA TTTGGCTATT 
TCCGCCTGGT TGCTGAGAAA GGCGATTAGC CCGATTAATG TAGCGGGACG CATCCATACC 
AATCTCGATC CTGACCGCGT GCGTGTGTAT ATAGAAAATA ATCGCCCTCT GGTGGGGGAA 
TACGCACTGT ATGTGGCCCC CCATGATGAC AAATTGTCTC TGATAGGCCT GGTGAATACC 
TCCGCCGATG TGGGTGAACT GGAAACGTCG GGAAAAGTGG CGCTGCGTGC CGGATCGTCA 
GTTGAGGATT ATCTCGCTGG GCGGCGACTT TTAGCGGGAG CAGATAATAG CTACGGCTAC 
CTGATTGGGG GCAATGGCCA GTGGCGCAAA GTACCGTTAG CGCTGTGGAA CCGTCAGCAT 
ACTGAACCTG CTGCGGGTGA AACGATCTTT ATCGGTTTCA ATCCTTCTGT TTTACCTCAG 
GATATGTCAT CACTTAACGA TCAGCTTGCT GACTACCTTG CTAACCGGAT CCCACTCGAA 
TGA 

 

Protein sequence

MLALNRITAL LLLVSGVAMS AQLTVKSPQQ TIAVVKLDDG TRLEKFYEQV PWPQNINWQT 
AFISDFATTQ NVRAQGDTLL QKLAELETRW RNSGDGDLAI SAWLLRKAIS PINVAGRIHT 
NLDPDRVRVY IENNRPLVGE YALYVAPHDD KLSLIGLVNT SADVGELETS GKVALRAGSS 
VEDYLAGRRL LAGADNSYGY LIGGNGQWRK VPLALWNRQH TEPAAGETIF IGFNPSVLPQ 
DMSSLNDQLA DYLANRIPLE