| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3004 |
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| Symbol | |
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| ID | 8531410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 3270128 |
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| End bp | 3270985 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | YP_003260357 |
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| Protein GI | 261822251 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATGG CAACCAGCCT GAGAGAGTTA CAGGAACAAA TCCGTGAGCG TTACGATTCG
CTCAGCAAGC GGTTACAGCA GGTCGCGCAT TATGTGCTGG ATAATACCAA CAGCATCGCG
TTCGATACCG TCGCGGTGAT CGCCGAACGC GCTGACGTCC CTCCCTCAAC GTTAATTCGC
TTCGCCAACG CCTTTGATTT CAGCGGGTTC AACGAAATGA AACAACTATT CCGCATGAAT
TTAGTGGAGG AAACCGCCAG TTATACTGAC CGTGCGCGGC TGTTTCGGGC GATGGAAGCT
GACGCGGTGC CAGAAACGCC GTTGGATATT CTGCATGAAT TTGCCCGCTC AAATGCACAG
GCAATGCAAC AACTGGCGGC TCGCACGCCG CAAGACGATC TGCAAAAAGC CGTCGATCTG
TTGGCGCAGG CAGAAACGAT CTATATCGTG GGGCTACGGC GCTCGTTCAG CGTTGCCACT
TACCTCACCT ACGCGCTCAG CCATCTGGAA AGCAACCCAA TTCTGGTCAA CGGTCTGGGA
GGCATGTTTC GCGAACAACT CAGCCGCGTC AACTCGCGCG ACGCGGTGGT TTCCATCAGT
TTCTCACCCT ATTCACAGGA AACCGTGATG GTCAGCGAGA TGGCAGCAAA AGCTGGTGCG
CGGCAAATCG TGATTACCGA CAGTCAGATC AGCCCGCTGG CAACGCTCAG CGATGTCTGC
TTTGTGGTGA AGGAAGCGCA GGTTGATGCG TTCCGTTCAC AGTCCGCTAC GCTATGTCTG
GTACAGTCGC TGATGGTATC GCTGGCCTAC CGGCAGGGAA ACGGCACAGA ACAGAGCGAA
AAACAGCGGC GCGGCTAG
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| Protein sequence | MPMATSLREL QEQIRERYDS LSKRLQQVAH YVLDNTNSIA FDTVAVIAER ADVPPSTLIR
FANAFDFSGF NEMKQLFRMN LVEETASYTD RARLFRAMEA DAVPETPLDI LHEFARSNAQ
AMQQLAARTP QDDLQKAVDL LAQAETIYIV GLRRSFSVAT YLTYALSHLE SNPILVNGLG
GMFREQLSRV NSRDAVVSIS FSPYSQETVM VSEMAAKAGA RQIVITDSQI SPLATLSDVC
FVVKEAQVDA FRSQSATLCL VQSLMVSLAY RQGNGTEQSE KQRRG
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