| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3000 |
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| Symbol | |
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| ID | 8531406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3263227 |
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| End bp | 3264165 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003260353 |
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| Protein GI | 261822247 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.434934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA TCATCAGCGT TACCGCAATC GCCATCGCAC TGGGTCTGTC TGGTTTTGCT
CAGGCCCAAA ATGAACAAAT CGTTTTCAGT ACGCCGAATC TCGCTATGCC GTTTGAGGTT
CACATGCAGC GCACCGCCGT CAAAGCAGCC AAAGAACTGG GCGTGAATTT GCAGGTGCTG
GATGGGCAGG GTAGCTCGCC GAAGCAGGCT GCCGATTTAG AGAATGCCAT CACGCGTGGT
GCGCAGGGCT TTGTGGTGTC ACCGAATGAC GTTAATGCGG TTTCCAGTGC TGTGACCGAA
ATTCAGGATG CCAAGCTGCC AGTGGTGACG CTGGATCGTT CGGTGAAAAC AGAAAAAGCG
GTGCCGCATT TTGGCGCTAA CAACTACAAA GGCGGTCAGG CGATTGCCGA TTATGTGAAA
ACCAAGTTCC CGAACGGTGC AGAGATCATT CTGCTGACCG GCCAACCGGG TTCTTCTTCC
AATATCGAGC GGACGCAGGG GATCCGCGAC AGCCTGAAAG CGGGCGGCAG CAAATATCAC
ATTGTGGCTG ACCAGACGGG GAACTGGATG CGTTCAGAAG GAATGCGCAT CGTTGAAAGT
GTTTTTCCTT CGCAGCCTAA ACGTCCGCAG GTGATCCTCT CTGCGAATGA CGATATGGCG
CTGGGCGCGA TTGAAGCGTT ACAGGGGCAG GGGCTGAAAC CCGGCGATGT GATGGTGACA
GGCTTTGATG CCGTGCCGGA AGCGCTGGCT CGCGTACGCG ACGGTTGGTT GGCGGTTACT
GCCGATCAGC GTCCAGGCTA TGCGGTGACC ACGGCATTAA CGCAGTTAAC CAATAACATC
CGCAGTAAAG CGCCGATCAC CGGGGCTGAC TACCAACCGA CCATGATTAC CAAAGATAAT
CTGAACGATG CCGAGCGCAT TGGCGAAGCG GGTAAATAA
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| Protein sequence | MKKIISVTAI AIALGLSGFA QAQNEQIVFS TPNLAMPFEV HMQRTAVKAA KELGVNLQVL
DGQGSSPKQA ADLENAITRG AQGFVVSPND VNAVSSAVTE IQDAKLPVVT LDRSVKTEKA
VPHFGANNYK GGQAIADYVK TKFPNGAEII LLTGQPGSSS NIERTQGIRD SLKAGGSKYH
IVADQTGNWM RSEGMRIVES VFPSQPKRPQ VILSANDDMA LGAIEALQGQ GLKPGDVMVT
GFDAVPEALA RVRDGWLAVT ADQRPGYAVT TALTQLTNNI RSKAPITGAD YQPTMITKDN
LNDAERIGEA GK
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