Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2989 |
Symbol | |
ID | 8531395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3250852 |
End bp | 3251898 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003260342 |
Protein GI | 261822236 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAA CGCTGTCTGT TCTGCGCAAA AAAGCGCGCC TGCTCACGCT AGCCTCATCG CTGATGGTGG CCTATGCATT ACCTGCCGCC GCAGAGGATT CTCTGACCCT CTACACCACG CGCGAGCCTG GACTCATTCA GCCACTGCTT GATGCCTTCA CTAAAGAGAC ATCTGTCAAC GTGAATACCG TGTTCATCAA GGACGGCATG CTGGAGCGTG TGAAGGCGGA AGGCCAAAAC TCACCGGCTG ACCTGCTGAT GACCGTCGAT GCCGGTAACC TGATCGATCT GGTGGAAGCT GGCGTTACCC AACCGATTCA GTCCAGCACG TTAACCGATG TCATCCCTGC CGCGCTGCGC GATAAAGACA ACCAATGGTT TGGCCTGTCG ATGCGTTCCC GCGTGCTCTA TGCGGAAAAA TCACTGCCGT TGACCAGCAT TACTTACGAA AATCTGGCCG ACCCGAAATG GAAAGGCAAA GTGTGTATCC GTGCGGGTCA ACACCCTTAC AACACCGCGC TGGTTGCCGC GATGATCGCA CACCATGGCG AAGCTAAAAC CGAAACCTGG CTGCGCGGTG TGAAAGAGAA TCTGGCACGT AAAGCCACCG GTGGTGACCG CGATGTCGCA CGCGATATTC TCGGTGGTAT CTGTGATGTG GGTCTGGCGA ACTCTTATTA TGTCGGCCAC ATGAAGAACG CTAAAGAAGG TACAGATGCC CGTAAATGGG GCGATGCCAT CAAGGTGGTT CAACCTACCT TTGAAAACGG CGGCACACAC GTCAATATCA GCGGCGCAGC CGTTGCACGT AATGCTCCGC ATAAAGATCA GGCCGTGAAA TTGATGGAAT ATCTGGTCTC CGCTCCGGCT CAGCAGATCT ACGCTCAGGC AAACTACGAA TATCCGGTTC GCAAAGGCGT TACGCTGGAT TCCACCATTG GCAGCACGAT TGGTGAAGTG AATGTGGATA GCACTCCGCT GACCGACATC GTTAAATTCC GTAAACAGGC CAGTCAGTTG GTAGATAAAG TTGGATTCGA TCAATAA
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Protein sequence | MSKTLSVLRK KARLLTLASS LMVAYALPAA AEDSLTLYTT REPGLIQPLL DAFTKETSVN VNTVFIKDGM LERVKAEGQN SPADLLMTVD AGNLIDLVEA GVTQPIQSST LTDVIPAALR DKDNQWFGLS MRSRVLYAEK SLPLTSITYE NLADPKWKGK VCIRAGQHPY NTALVAAMIA HHGEAKTETW LRGVKENLAR KATGGDRDVA RDILGGICDV GLANSYYVGH MKNAKEGTDA RKWGDAIKVV QPTFENGGTH VNISGAAVAR NAPHKDQAVK LMEYLVSAPA QQIYAQANYE YPVRKGVTLD STIGSTIGEV NVDSTPLTDI VKFRKQASQL VDKVGFDQ
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