Gene Pecwa_2978 details

Gene Information

• Locus tag: Pecwa_2978
• ID: 8531384
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3239729
• End bp: 3240328
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 51%
• Product: nitroreductase
• Protein accession: YP_003260331
• Protein GI: 261822225

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAATG CTTTTTTGCA ATCAATCAAG GCCCGTCGTT CAATCTATGC CATCGGCAAC 
AAATTGCCGA TACCAGAAGA TCAGGTTACC GCGCTCATTA CCGAAGCCGT TAATGAAAGC 
CCCTCCGCTT TTAATTCGCA AAGCTCCCGC GTTGTCATTC TGTTCGGCGA GCAACACCAC 
AAGCTGTGGG ATATCGTTAA ACAGCAACTG AAGAAAATTG TGCCTGCGGA CGCGTTTGCC 
TCGACAGAAA ACAAACTGGC CTCCTTTGCT GCCGGTGCGG GAACCGTCCT GTTCTTTGAA 
GACACCAGCG TGATTGAAGC GCTGCAGGAA AAATTCGCAC TTTATGCCGA TAACTTCCCG 
GTTTGGTCAG AACACTCAAC CGGTATCGCT CAGGCCGCCG TGTGGTCCAC GCTGGCGCAG 
GAAAAAATCG GTGCCTCACT CCAGCATTAC AATCCGCTGA TCGACAATGA CGTCAAAGCA 
CAGTGGGATC TGCCTGCCAG TTGGAAACTG CGTGCTCAAA TGCCATTCGG CTCAATCGAG 
CAGCCTGCGG GTGAGAAAAC CTATATCGCC TTTGAAGAGC GTTTCCGCGT ATTTAAGTAA 

 

Protein sequence

MSNAFLQSIK ARRSIYAIGN KLPIPEDQVT ALITEAVNES PSAFNSQSSR VVILFGEQHH 
KLWDIVKQQL KKIVPADAFA STENKLASFA AGAGTVLFFE DTSVIEALQE KFALYADNFP 
VWSEHSTGIA QAAVWSTLAQ EKIGASLQHY NPLIDNDVKA QWDLPASWKL RAQMPFGSIE 
QPAGEKTYIA FEERFRVFK