Gene Pecwa_2966 details

Gene Information

• Locus tag: Pecwa_2966
• ID: 8531372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3225153
• End bp: 3225947
• Gene Length: 795 bp
• Protein Length: 264 aa
• Translation table: 11
• GC content: 46%
• Product: Cellulase
• Protein accession: YP_003260319
• Protein GI: 261822213

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.302694
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGACTG TGAATACCCA GCCACACCCT ATTTTCCGCG TATTATTGCC CGCAGTATTT 
TCTTCCTTGC TACTCTCATC ACTAACAGTG TCTGCTGCCA GTTCATCAAA CGATGCGGAT 
AAACTCTATT TCGGTAATAA TAAATATTAC CTATTCAATA ACGTATGGGG AAAAGATGAA 
ATAAAAGGAT GGCAGCAAAC GATTTTCTAT AATAGCCCAA TTAGCATGGG GTGGAACTGG 
CACTGGCCAA GCAGTACCCA CAGTGTTAAA GCCTATCCTT CACTGGTGAG CGGTTGGCAC 
TGGACGGCGG GCTATACGGA AAATAGCGGA TTGCCGATAC AATTATCCAG TAATAAGAGT 
ATCACCAGTA ACGTTACTTA TTCTATCAAG GCTACGGGTA CTTACAACGC CGCTTACGAC 
ATCTGGTTCC ATACTACCGA TAAAGCCAAC TGGGACTCGT CGCCTACCGA CGAATTGATG 
ATTTGGCTAA ATGATACCAA TGCAGGCCCT GCGGGTGATT ATATTGAAAC CGTTTTCCTC 
GGCGACAGCA GTTGGAACGT ATTCAAAGGC TGGATCAACG CGGATAATGG TGGAGGTTGG 
AATGTCTTTT CCTTTGTCCA TACTTCCGGC ACCAACAGTG CATCACTCAA TATTCGTCAC 
TTCACCGACT ATTTGGTGCA GGCAAAGCAA TGGATGAGCG ATGAAAAATA TATCAGCAGC 
GTTGAGTTTG GCACCGAGAT CTTTGGCGGC GATGGGCAGA TCGACATCAC CGAATGGCGC 
GTAGACGTAA AATAG 

 

Protein sequence

MQTVNTQPHP IFRVLLPAVF SSLLLSSLTV SAASSSNDAD KLYFGNNKYY LFNNVWGKDE 
IKGWQQTIFY NSPISMGWNW HWPSSTHSVK AYPSLVSGWH WTAGYTENSG LPIQLSSNKS 
ITSNVTYSIK ATGTYNAAYD IWFHTTDKAN WDSSPTDELM IWLNDTNAGP AGDYIETVFL 
GDSSWNVFKG WINADNGGGW NVFSFVHTSG TNSASLNIRH FTDYLVQAKQ WMSDEKYISS 
VEFGTEIFGG DGQIDITEWR VDVK