Gene Pecwa_2956 details

Gene Information

• Locus tag: Pecwa_2956
• ID: 8531362
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3215409
• End bp: 3217421
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 53%
• Product: excinuclease ABC subunit B
• Protein accession: YP_003260312
• Protein GI: 261822206

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0537123
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAAAG TATTTACACT GCATTCCGAC TTTAAACCGG CAGGCGATCA GCCCGAGGCT 
ATTCGTCGTT TAAAAGAAGG CCTGGAGGAC GGGTTAGCAC ACCAAACGCT GCTCGGAGTA 
ACAGGTTCAG GTAAAACGTT CACGATAGCC AACGTGATTG CCGACCTCAA TCGGCCGACA 
ATGATGCTGG CGCCGAATAA AACGCTAGCC GCTCAACTGT ACGGCGAAAT GAAAGAGTTC 
TTCCCTGATA ATGCTGTCGA GTATTTTGTC TCTTACTATG ACTACTATCA GCCAGAGGCC 
TACGTTCCAA GCTCAGACAC CTTTATTGAG AAAGATGCGT CGGTTAACGA ACATATCGAA 
CAGATGCGTC TTTCAGCGAC AAAAGCGCTG CTGGAGCGGC GCGATGTGAT CGTTGTGGCC 
TCGGTGTCCG CTATCTACGG TCTGGGCGAT CCCGATCTCT ATCTGAAAAT GATGCTGCAT 
CTAACGCAGG GGATGCTGAT CGACCAGCGT GCTATTTTGC GGCGTCTGGC AGAATTACAA 
TATGCCCGCA ACGATCAGGC ATTTCAGCGC GGTACGTTTC GCGTGCGTGG TGAGGTGATC 
GATATTTTCC CTGCGGAGTC TGACGAAATA GCGCTGCGCG TTGAATTGTT CGATGAAGAA 
GTGGAACGGC TGTCGCTGTT TGATCCGTTG ACGGGGCATG TTCTTCAAAC GGTGCCGCGC 
TATACCATCT ACCCTAAAAC GCACTACGTC ACGCCGCGTG AGCGTATTTT ACAGGCGATG 
GAAGACATTA AAGTTGAATT GGCCGATCGT AAAAAGGTGT TACTGGCCAA CGATAAGCTG 
GTGGAAGAGC AGCGCCTGAG CCAGCGCACG CAGTTTGATC TGGAGATGAT GAACGAGCTT 
GGTTACTGCT CAGGTATCGA AAACTACTCA CGCTATCTTT CAGGTCGTGG CCCCGGTGAG 
CCACCGCCGA CGCTGTTTGA CTACCTTCCT GCGGATGGGC TGTTGGTGAT TGATGAATCC 
CACGTCACCG TGCCCCAGAT CGGCGGGATG TATCGCGGCG ACCGTGCGCG TAAAGAGACG 
CTGGTCGAAT ACGGTTTCCG GTTGCCTTCG GCGTTGGATA ACCGACCGAT GAAGTTTGAA 
GAATTTGAAG CGTTGGCCCC GCAGACGATC TATGTGTCTG CGACACCGGG TAACTATGAG 
CTGGAAAAAT CGGGCGGTGA AATTATCGAT CAGGTGGTTC GGCCCACCGG ATTGCTCGAC 
CCGCTCATTG AAGTACGGCC TGTCGCGACA CAGGTGGACG ACCTGCTTTC CGAAATTCGC 
CTGCGTGCGG TGATTAACGA ACGTGTGCTG GTGACGACGC TGACCAAGCG GATGGCGGAA 
GACCTGACGG AATATCTGGA AGAGCACGGC GAGCGGGTGC GCTATCTGCA CTCGGATATT 
GATACCGTCG AGCGTGTGGA AATCATCCGG GATTTACGCC TTGGTGAGTT CGATGTGCTG 
GTCGGTATCA ACCTGTTGCG TGAAGGGCTG GATATGCCAG AAGTGTCGCT GGTGGCGATT 
CTGGATGCTG ACAAAGAAGG CTTCCTGCGC TCTGAACGCT CCCTGATCCA GACGATTGGC 
CGCGCGGCGC GTAACCTGCG TGGCAAGGCT ATTCTTTACG GTGACAGAAT TACAGCGTCA 
ATGGCGAAAG CGATTAGCGA AACAGAGCGG CGTCGCGAGA AGCAGGAGGC GTACAACACC 
GAGCACGGGA TTGTGCCGCA GGGAATTAAT AAGAAAATTT CCGATATTCT GCAACTGGGT 
CAATCGGCGA GTAAAGGCAA AGGGCGAGGT AACCGTAAAG CGGCAGAACC CGCAGCGCGT 
TATGAACTCA TGACGCCGAA GGCGCTGGAG CTGAAAATCC GCGAGTTGGA AAGTAAGATG 
TTAACGCACG CGCAGAATCT TGAATTCGAA GAGGCTGCCG CCTTGCGCGA TGAAGTGCAG 
GCATTACGCG CACAATTTAT TGCCGTCTCT TAG 

 

Protein sequence

MSKVFTLHSD FKPAGDQPEA IRRLKEGLED GLAHQTLLGV TGSGKTFTIA NVIADLNRPT 
MMLAPNKTLA AQLYGEMKEF FPDNAVEYFV SYYDYYQPEA YVPSSDTFIE KDASVNEHIE 
QMRLSATKAL LERRDVIVVA SVSAIYGLGD PDLYLKMMLH LTQGMLIDQR AILRRLAELQ 
YARNDQAFQR GTFRVRGEVI DIFPAESDEI ALRVELFDEE VERLSLFDPL TGHVLQTVPR 
YTIYPKTHYV TPRERILQAM EDIKVELADR KKVLLANDKL VEEQRLSQRT QFDLEMMNEL 
GYCSGIENYS RYLSGRGPGE PPPTLFDYLP ADGLLVIDES HVTVPQIGGM YRGDRARKET 
LVEYGFRLPS ALDNRPMKFE EFEALAPQTI YVSATPGNYE LEKSGGEIID QVVRPTGLLD 
PLIEVRPVAT QVDDLLSEIR LRAVINERVL VTTLTKRMAE DLTEYLEEHG ERVRYLHSDI 
DTVERVEIIR DLRLGEFDVL VGINLLREGL DMPEVSLVAI LDADKEGFLR SERSLIQTIG 
RAARNLRGKA ILYGDRITAS MAKAISETER RREKQEAYNT EHGIVPQGIN KKISDILQLG 
QSASKGKGRG NRKAAEPAAR YELMTPKALE LKIRELESKM LTHAQNLEFE EAAALRDEVQ 
ALRAQFIAVS