Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2943 |
Symbol | |
ID | 8531349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3205009 |
End bp | 3206766 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003260299 |
Protein GI | 261822193 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.773013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCCGT TCGTCATGAC TGATTCTCCC ACCCAGATCG CGTTGGACAG GCTGGAGAAG CGCTTTGCCG GACAGGAAAA ACCCGCACTT GCCAGCCTTA CCGCCGAGAT ACGCAGCGGT GCCGTGACCG GATTGGTCGG GCCTGACGGC GCGGGGAAAA CCACCCTGCT GCGTATGCTG GCGGGATTGT TAACACCTAG CCACGGCTCG TTACGCGTCG CCAACCTTGA TCCCATCAAC GAGGATCGTC AGCTCCATGC CATTTTGGGC TACATGCCAC AAAAATTCGG CCTGTATGAG GATCTGACGG TGATGGAAAA CCTGACGCTA TATGCCGACT TACGCGGTAT CACCGGCGAT GTGCGCAAAG ACACCTTTGA CCGCTTGCTG TCATTTACCG ACTTAACCCG CTTTACCGAC AGACTGGCAG GCAAATTATC CGGCGGTATG AAACAAAAGC TGGGGCTGGC CTGTACGTTA CTGGGACAAC CTAAGGTGCT TCTGCTGGAT GAACCGGGCG TAGGCGTCGA TCCCATTTCT CGCCGTGAGC TGTGGCATAT GGTGCACGAA CTGGCTGACG ACGGCATGTT GATCTTGTGG AGTACGTCTT ACCTTGATGA GGCGGAACAG TGTCGGGATG TGCTGCTGCT GAACGAAGGC GAACTGCTGT ATCGCGGCGC GCCACGCGAT CTGACCGCAC GCATGGCGGG ACGCTGTATT CTGGTTGACA CAGGAACGCG ACGACATCGG GATGTGTTGC AAGAGGCGCT GCGTCTGCCG CAGGTCAGCG ACGGGGTGAT CCAGGGGCAA TACGTCCGGT TGATGCTAAC ACCCGACGCC GATCGGGCAG CGCTGCTCTC CGCCTTACAT CTGGACGCCA ACAGCCTGCA CGATACCGAT CCGCGTTTTG AAGATGCGTT TATCGATCTG CTGGGCGGCG GCCCGGCCAG TGATTCATCG CTGGCGAGCA TCATGCCGCA GATTGATATC AGCGGCGGTG AAACGGTGAT TGAAGCACAA GCGCTGACGA AAAAATTTGG CGATTTCGCC GCAACCGATC ATGTCAGTTT TCACGTAAAA CGCGGTGAGA TTTTCGGCCT GCTCGGCCCG AACGGAGCGG GAAAATCAAC GACTTTCAAG ATGATGTGTG GCCTGCTAAT ACCGACTGAC GGCAAGGCGC TGGTGCTCGA TATGGATCTG AAAACCAGCT CCGGCAAAGC ACGCCAGCAT TTGGGCTACA TGGCGCAAAA GTTCTCGCTC TACGGCAACC TGACCGTCGA ACAAAACCTG CGGTTCTTCT CCGGCGTCTA TGGGCTCAAG GGTAAAGCGC AGCGCGATAA AATAGCCGGT ATGACCGAAG CCTTCAACTT CCAACCGATT TACCGCCAAA CGCCGGACGC CCTGCCACTG GGCTTCAAGC AGAGACTGGC ACTGGCCTGT GCGTTGATGC ACGAACCCGA CATTCTGTTT CTTGACGAAC CCACCTCCGG CGTCGATCCG CTGACCCGGC GCGAATTCTG GATACACATC AATGGCATGG TTAATCGCGG TGTCACCGTC ATGGTCACCA CCCACTTCAT GGACGAAGCC GAATACTGCG ACCGCATCGG GCTGGTATAT CGCGGCAAAC TGATCGCCAG CGGCACGCCG GACGAGCTGA AACATCAGGC CGCCAGCGCA CAAACGCCAT CGCCGACGAT GGAAGAAGCG TTTATCGCGC TGATTCAGGC ATACGACGGG GAAGCGGAAC ATGGTTGA
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Protein sequence | MSPFVMTDSP TQIALDRLEK RFAGQEKPAL ASLTAEIRSG AVTGLVGPDG AGKTTLLRML AGLLTPSHGS LRVANLDPIN EDRQLHAILG YMPQKFGLYE DLTVMENLTL YADLRGITGD VRKDTFDRLL SFTDLTRFTD RLAGKLSGGM KQKLGLACTL LGQPKVLLLD EPGVGVDPIS RRELWHMVHE LADDGMLILW STSYLDEAEQ CRDVLLLNEG ELLYRGAPRD LTARMAGRCI LVDTGTRRHR DVLQEALRLP QVSDGVIQGQ YVRLMLTPDA DRAALLSALH LDANSLHDTD PRFEDAFIDL LGGGPASDSS LASIMPQIDI SGGETVIEAQ ALTKKFGDFA ATDHVSFHVK RGEIFGLLGP NGAGKSTTFK MMCGLLIPTD GKALVLDMDL KTSSGKARQH LGYMAQKFSL YGNLTVEQNL RFFSGVYGLK GKAQRDKIAG MTEAFNFQPI YRQTPDALPL GFKQRLALAC ALMHEPDILF LDEPTSGVDP LTRREFWIHI NGMVNRGVTV MVTTHFMDEA EYCDRIGLVY RGKLIASGTP DELKHQAASA QTPSPTMEEA FIALIQAYDG EAEHG
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