Gene Pecwa_2914 details

Gene Information

• Locus tag: Pecwa_2914
• ID: 8531320
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3170561
• End bp: 3171100
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 53%
• Product: isopentenyl-diphosphate delta-isomerase, type 1
• Protein accession: YP_003260271
• Protein GI: 261822165

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGTTGA CTGAAGTCGT GCTGGTTGAT GAAAATGATA AGCCAACGGG CGTCATGGAA 
AAGCAGGAAG CGCACGTAAA AGGCGCGTTA CACCGTGCGA TTACTGTCTA TATTTTCAAC 
TCTCGTCAGC AGTTGTTATT ACAGCAGCGG GCAGAAGCGA AGTATCACAG CGGCGGTTTG 
TGGAGCAACA CCTGTTGCAG TCACCCAGCC CCCGGTGAGG AGACGTTACA GGCGGCACAC 
CGCCGTTTGT ATGAGGAAAT GGGGTTACGC TGTGCGCTGA CGCCGATGTT TACGCTGACC 
TATCGTCTGC CGCTGGATAA CGGGTTGATT GAGCATGAAC TGGGGCATGT ATATTTTGGC 
GTGACGGACG ACGCTCCGCA GATCAATCCC GATGAAGTGT CGAGCTATGA ATACCAGTCG 
ATAGATGCGA TTGCAGGGCG GATGATGGCA ACACCTGAGC AGTTTACGGC CTGGTTCCAA 
CTGACTTTCG CGCGTATTCC TGAGTACTGG CAGGCGTTCA AATCTGAGCC ATCACGGTAG 

 

Protein sequence

MPLTEVVLVD ENDKPTGVME KQEAHVKGAL HRAITVYIFN SRQQLLLQQR AEAKYHSGGL 
WSNTCCSHPA PGEETLQAAH RRLYEEMGLR CALTPMFTLT YRLPLDNGLI EHELGHVYFG 
VTDDAPQINP DEVSSYEYQS IDAIAGRMMA TPEQFTAWFQ LTFARIPEYW QAFKSEPSR