| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2905 |
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| Symbol | |
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| ID | 8531311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3159619 |
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| End bp | 3160986 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_003260262 |
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| Protein GI | 261822156 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGGA TCGCGATAGT CGTGTTGTTG GGGCTGCTTT CTTCGGGTGC TAACGCATTA
GGGTTACTTG ATGCCTGGGA GTTGGCGCTG CGCAATGACG CACAGTTTCG TGCTGCGGGG
TTTGAGCATG CCGCAGGTCA AGAAGAGGAG ACGATCGGGC GTGCTAACCT GCTCCCCAAC
CTCCAATATG GCTATAGTGC TAATCGTAGC CATTCTACAG TCACCCAAAC GGATAATTTC
AACAATAACA CGCTAAAACG TGATTATAAC AGCTACACGT CGACGCTATC GCTGCGTCAA
CCGTTGCTGG ATTATGCGGC CTGGGCGCGT TATCAGCAGG GCGTTGCCCG CACACTGATG
GCCGATCAGC GTTTTCGCGA TCGTAGTCAG GATCTCATGG TACGGTTATA CAAAGCCTGG
AGCAGTGCGC TGTTGGCGCA GGAAAAACTA CAACTGTTGG ATGCGCAGCA GCGAGCCTAT
CAGGAACAGT TGGCGCTGAA TAAACGTCTA CTGCTGGCAG GCGAAGGTAC GTTAACGGAT
GTGCGGGAAA CGGAGGCGCG TTTTACGCTG ACTGAAGCAC AGCGCATTGA ACAGCAGGAT
AATCTGGATT CTGCGATCGT CGATCTGGAG AATATGACGG GCGCGGCGCT GGATATCACG
GCGCTATATC CTCTAACGCT CACGCAACTG CCGTCTACGG AATCAGCCAG GCAGACGCTG
GCGCAGTGGC GCGATCTTGC TGTGCAGCAC AACGCCAAAC TGGCGACGCA GCGAGAAGGG
CTGGCGGTCA GCCATTATGA AATCGAACGC AGTCGCGCTG GCCATTTACC TACGCTGTCG
CTGGTGGCAT CGTCGCGCAA TAGTCGTTCG GAAAGTGAAT ACAACTACAA TCAGAAATAC
GACACGCAGA GCGTCGGTTT GCAACTGAAT GTCCCGCTTT ACTCCGGTGG TTCCGTTTCG
GCATCCATGC GGCAAGCGGC AGCAGAATAT CAGCAAAATC AGGCAGAGTT GGACGATCAA
ACCAAGTCCA CGCTGGCAGA ATTGAAAAAA TATTACAATT TGTACAATAA CGGCTCGGCG
AAAATTAACG CTTGGCAAAT GACGGCCTCG TCGGCACAAG AAGCTGTCAA GGCCACACGA
TTGAGTGTCG TGGGCGGTGA ACGCATTAAT CTGGATATTC TGCTGGCCGA ACAGGATTGG
TATAACGCCC GACGAGAGCT GGCGGAAGCG AAATATAGTT GGCTTCAGGC ATGGCTATTA
CTGCGCTATA CGGCTGGTAC GCTGAACGAG AAAGATATTC TGGAACTGGC AGCCTGGTTT
CAGCCAGCGA CGAATTCTTT AGACACTCAT AAAGGTATGA AAAACTAA
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| Protein sequence | MQRIAIVVLL GLLSSGANAL GLLDAWELAL RNDAQFRAAG FEHAAGQEEE TIGRANLLPN
LQYGYSANRS HSTVTQTDNF NNNTLKRDYN SYTSTLSLRQ PLLDYAAWAR YQQGVARTLM
ADQRFRDRSQ DLMVRLYKAW SSALLAQEKL QLLDAQQRAY QEQLALNKRL LLAGEGTLTD
VRETEARFTL TEAQRIEQQD NLDSAIVDLE NMTGAALDIT ALYPLTLTQL PSTESARQTL
AQWRDLAVQH NAKLATQREG LAVSHYEIER SRAGHLPTLS LVASSRNSRS ESEYNYNQKY
DTQSVGLQLN VPLYSGGSVS ASMRQAAAEY QQNQAELDDQ TKSTLAELKK YYNLYNNGSA
KINAWQMTAS SAQEAVKATR LSVVGGERIN LDILLAEQDW YNARRELAEA KYSWLQAWLL
LRYTAGTLNE KDILELAAWF QPATNSLDTH KGMKN
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