| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2897 |
|---|
| Symbol | |
|---|
| ID | 8531303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3154851 |
|---|
| End bp | 3156278 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | tail sheath protein |
|---|
| Protein accession | YP_003260254 |
|---|
| Protein GI | 261822148 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCCGCTA ATTATTTACA CGGTGTAGAA ACGATTGAAG TTGAAACGGG TGCTCGTCCG
GTGAAAACCG TCAAGTCGGC GGTAATTGGG TTGATTGGTA CGGCACCGCA GGGAGCGGTA
AATGACGTCA CGCTGTGCCT GTCCGAAAAA GATGCGGCGC AGTTTGGTAA CCAGTTCGGC
GGTTATACCA TCCCACAGGC GCTGGATGCG ATTTACGATC ATGGAGCAGG CACCGTACTG
GTGATCAACG TGCTGGATCC GGCGAAACAC AAATCCTCTG TGAGCGCGGA AAAAGTCACG
TTTGATAAAG CAACGGGGAC GGCGCAACTG GCTAACCGCG CTATCGCCAA GTTGGTACTG
ACTGCGGCAG AAGGTGGTGA GCCGTTTGTT GAAGGTCAGG ATTATACGCA AGATGCTCAA
ACCGGTGTAC TGAAAAACTT GGGTAAAAAT ATCGATGTTG CTGCCGTGGT CAGTGCGTCT
TATGACTTTG CTGATGTCAC GAAAGTGACT GCCGCTGACA TCATTGGCAG CATCAACGCC
GCGGGCAAAC GCACCGGTAT GAAGCTGCTG AACGATACCT ACAATCTGTA CGGCTTCTTC
GCCAAAATTC TGATTTCTCC GGTGTTCTGT ACGCAAAACA GCGTAACGAC CGAACTGATC
TCGTTGGCGG ACAAACTGGG CGCGATTGCC TACATCGATG CGCCAATCGG TACCACCTTT
GCACAGGCGC TGAGCGGTCG TGGCCCGGAA GGCACGATCA ATTTCAACAC CAGCTCTGAA
CGCGCTCGTC TGTGTTATCC GCACGTAAAA GTATACGACG CAGAAACCAA CGGCGAACGC
TTGGAGCCGC TGTCGGCGCG TGCCGCTGGT CTGCGTGCCA AAGTCGATCT GGAGAAAGGT
TTCTGGTGGT CATCATCCAA TCAGGAAATC AAAGGGATCA CCGGCGTAGA GCGCCAATTG
TCTGCGATGA TTGACGATCC GCAGAGTGAA GTGAACCTGC TGAACGAGCA GGGCATTAGC
ACTATCTTTA ATAGCTACGG TTCCGGCCTG CGCCTGTGGG GCAACCGCAC CGCAGCCTGG
CCAACCGTGA CGCACATGAA GAACTTTGAA AACGTGCGTC GTACTGGTGA TGTGATTAAC
GAATCTATCC GCTACTTCAG CCAACAATAC ATTGACATGC CGATCAATCA GGCGTTGATC
GATGCTCTGG TGGAATCGGT TAACGCCTAC GGCCGCAAGC TGATCGGTGA CGGCGCGCTG
TTGGGTTTCA AATGCTGGTT CGATGCCGCT CGTAACGAGC AAACCGAGCT GGCGGCAGGG
CACCTGTTGC TTAACTACAA ATTCACTCCG CCGCCACCGC TTGAACGTCT GACCTTTGAG
ACGGAAATCA CCTCAGAATA CCTGGTAACG CTGGAGGGCA CTAACTGA
|
|---|
| Protein sequence | MAANYLHGVE TIEVETGARP VKTVKSAVIG LIGTAPQGAV NDVTLCLSEK DAAQFGNQFG
GYTIPQALDA IYDHGAGTVL VINVLDPAKH KSSVSAEKVT FDKATGTAQL ANRAIAKLVL
TAAEGGEPFV EGQDYTQDAQ TGVLKNLGKN IDVAAVVSAS YDFADVTKVT AADIIGSINA
AGKRTGMKLL NDTYNLYGFF AKILISPVFC TQNSVTTELI SLADKLGAIA YIDAPIGTTF
AQALSGRGPE GTINFNTSSE RARLCYPHVK VYDAETNGER LEPLSARAAG LRAKVDLEKG
FWWSSSNQEI KGITGVERQL SAMIDDPQSE VNLLNEQGIS TIFNSYGSGL RLWGNRTAAW
PTVTHMKNFE NVRRTGDVIN ESIRYFSQQY IDMPINQALI DALVESVNAY GRKLIGDGAL
LGFKCWFDAA RNEQTELAAG HLLLNYKFTP PPPLERLTFE TEITSEYLVT LEGTN
|
|---|
| |