Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2878 |
Symbol | glnH |
ID | 8531284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3138232 |
End bp | 3138978 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | glutamine ABC transporter periplasmic protein |
Protein accession | YP_003260236 |
Protein GI | 261822130 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0116852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAC TACTTAAGGC CTCTTTGGCT GCATTGACGC TAATGATGAG CGTATCCAGT TATGCCGCTG AGAAAGAACT GATTGTCGCG ACAGACACCG CTTTTGTCCC TTTTGAATTC AAACAAGGCG ACAAGTACGT CGGTTTTGAC ATCGACCTCT GGGATGCTAT CGCTAAACAG CTCAACCTGA AATACACCCT GAAGCCAATG GACTTCGGCG GTATTATTCC TGCCCTGCAA ACGCGTAACA TCGATTTGGC GCTCGCAGGC ATTACCATTA CCGAAGAGCG TAAAAAAGCA ATCGATTTCT CTGATGGTTA CTATGACAGC GGCCTGCTGG TGATGGTTAA AGCGGACAAC AACGATATCA AAGGCGAGCA GGATTTAGCC GGTAAAGTGG TTGCGGTGAA AAGCGGAACG GGCTCCGTTG ATTACGCGAA AGCCAATATC AAAACCAAAG ATCTGCGCCA GTTCCCGAAT ATCGACAACG CCTATATGGA ACTGGGCACC AATCGTGCTG ACGCTGTTCT ACACGATACG CCAAATATCC TCTACTTCAT CAAAACCGCA GGCAATGGCC AATTTAAAGC GGTAGGTGAT TCTATTAAAG CCCAGCAATA CGGCATCGCG TTCCCGAAAG GCAACAACGA GCTGCGTGAA AAAGTGAATG GCGCCCTGAA AACGCTGCGT GAAAACGGCA CTTATGCTGA GATCTACAAG AAGTGGTTTG GCGTAGAACC TAAGTAA
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Protein sequence | MKSLLKASLA ALTLMMSVSS YAAEKELIVA TDTAFVPFEF KQGDKYVGFD IDLWDAIAKQ LNLKYTLKPM DFGGIIPALQ TRNIDLALAG ITITEERKKA IDFSDGYYDS GLLVMVKADN NDIKGEQDLA GKVVAVKSGT GSVDYAKANI KTKDLRQFPN IDNAYMELGT NRADAVLHDT PNILYFIKTA GNGQFKAVGD SIKAQQYGIA FPKGNNELRE KVNGALKTLR ENGTYAEIYK KWFGVEPK
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