Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2873 |
Symbol | |
ID | 8531279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3133231 |
End bp | 3134400 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003260231 |
Protein GI | 261822125 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00211826 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGTAG CACCAACGGC CCGCACGCGG GCTTTTCTTT TCTTTACGAT TATTCTGTTG GGGTTGAATT TACGCCCTGT TCTGGCGGGC ATTGGTCCGT TGTTGAATCA GATTCAGGCC GCAACGGGCC TGGATGACAG CATGGCCGGG ATGTTAACGA CGCTCCCTGT GTTCGCTATG GGGTGGTGCG CGTTATATGG CGGGCAATTA CAGGCGCGTC TTGGTGAGTA TCGAGGCGTC ACGCTGGGTA TCGTGGTCAT TGCCTTGGCG TGTAGCACCC GTTGGTGGCT GAATAGCGGT ACTGCTTTAT TGGTTAGTGC GGCGCTTGCT GGTGTCGGAA TTGCCTTGAT TCAGGCGCTG GTGCCGTCGT TTATCAAGCT CCATTTTGGT CGTCATAGCA GTCTTCTTAT GGGCTTTTAC ACCACGGCGA TAATGACCGG AGCGGCGTTT GCTGCTTCAT CGGTCTCTCC GATGGCAAAT GCGTGGGGCT GGCAAAGTGC GTTGGCCTGC TGGGGAATTG TGGCGTTGGT TGCGGTGGTG GCCTGGCGAT GCGTTCCTAA AGCGTATACC ACGAAGCAAG ATGCAGTGGC CGTTTTAGCG ACGCGTCGAA GTGGAATGGA CTGGCTGCTG ATGGTGTTCT TTGGCATTGG GACGGGCGCA TATACCCTGG TGCTGGCATG GTTACCGCCG TATTACATGC AACTGGGATT AGATGCGACA CAAAGTGGCC TGATGTTAGG CGCATTAACG ATGACGGAAG TGATTTCCGG TCTGCTGGTA TCAACGTTCA TTAACCGTTT TCCCGATCGA CGGAAGTTGC TACTTCCTAT TTTGGCTGTG ATGCTGGTGG GCATGATTGG GCTGATTGCC GCCCCGCTGA CGTTCACATA CCCTATCATC ATCATGCTGG GGATTGGGAT TGGCGCGCTG TTCCCGCTGT CGCTGATCGT GGCATTGGAT CAGGTGACTG AACCGCATAA AACGGGCTCG CTGATGGGTT TTGTGCAGGG TGGTGGCTAT ATCCTCGCCA GTTTAATGCC GCTGCTCGCC GGGTTTATAC GTCAGCATAC GGCAGGTTTG GAGCAAGCCT GGATGATTAT GACCGTTGGT GTGGTTGTGT TGATTATCAT GGCGACCCGT TTTGCTCCGT TGAAGAGTCT GGGCCGCTAA
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Protein sequence | MVVAPTARTR AFLFFTIILL GLNLRPVLAG IGPLLNQIQA ATGLDDSMAG MLTTLPVFAM GWCALYGGQL QARLGEYRGV TLGIVVIALA CSTRWWLNSG TALLVSAALA GVGIALIQAL VPSFIKLHFG RHSSLLMGFY TTAIMTGAAF AASSVSPMAN AWGWQSALAC WGIVALVAVV AWRCVPKAYT TKQDAVAVLA TRRSGMDWLL MVFFGIGTGA YTLVLAWLPP YYMQLGLDAT QSGLMLGALT MTEVISGLLV STFINRFPDR RKLLLPILAV MLVGMIGLIA APLTFTYPII IMLGIGIGAL FPLSLIVALD QVTEPHKTGS LMGFVQGGGY ILASLMPLLA GFIRQHTAGL EQAWMIMTVG VVVLIIMATR FAPLKSLGR
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