| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2872 |
|---|
| Symbol | |
|---|
| ID | 8531278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 3131759 |
|---|
| End bp | 3133183 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003260230 |
|---|
| Protein GI | 261822124 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0273189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGATATC TCCAAGACCG TTTCATGAAA AAATTAAAAG ATACAGACTG GTATAAAAAG
CGTTACTCCA ACCGCGTTCT CTTCTGGAGA GAAATATCAC CACTCGCCTT CCCTATCTTT
ATTGAAGGCC TCTGCGTCGT GTTGATGGGA GTTTTCAGTA CGTTCCTGGT CAGTTGGCTG
GGAAAAGAGG CCATGGCGGC CGTCGGTCTG GCTGATAGCT TCAACATGGT CATCATTGCG
TTCTTCACTG CGGTCGCATT GGGGACCGCA GTTGTTGTTG CTTTCAGTCT GGGGCAACGC
AATAGAAAGC AGGCACGTTC TGCCGCTCGC CAATCAATGT CATTACTGGT TTTGTCATCG
TTTCTGTTGG TCGCGCTGGT TGAATTTGCT GGTTCAGCAA TCATCAATCT GATCGCAGGA
CAGGCCGATG AGCAGGTTAA AACGCTGGCT CTCACGTTCC TTCGCTGGAC AGTGTGGGGA
TATCCTGCTG TCGCTATCGC GTTAGTCGGT TGCGGCGCGC TCCGGGGCGC GGGGAATACC
AAGTTACCCA TGGTCATCAA TATTGGGATG AACATCCTCA ATATTGCCAT CAGTAGCCTA
CTGATTTACG GGGCATTCTC CTGGGATGGA CTCGGTTTTA TCGGTGCAGG CATCGGAATT
ACCATTTCAC GCTATATCGG AGCGATACTC GTGATTCTGA CGCTGATGCA CGGTTTTAAC
GGTGCGCTGC GCATACCCTT CAGGTCTTAC TTTGCACCTT TTACCGTATC GATTCTCTAC
GAGGTGCTCA GCATCGGGAT CCCCGCCAGC ATCGAATCCG TGATGTTTAA TATCGGTAAA
CTCATCACCC AACGTTTTGT GGCAGGCATG GGGACCGAAG TGATTGCCGG CAACTTTATT
GCTTTCTCCA TCTCGACGCT GATTAACCTG CCCGGCAATT CGCTCGGCGC AGCCGCCACG
ATTATTGTTG GTACACGGCT GGGGAAAGGT CAGATCATGC AGTCCACTCG TCAGCTAAAA
CACATTTTCT GGCTATCCAA CATTGGGCTG TGTGCTCTTG CCGTACTTTC GGTCCCTAGC
GCTAGCTTTT TGGCATCGTT TTACACCAAT GAACCGGAAG TGATCGACGT AGCAAAACAC
CTCCTGTGGC TTAATGCGCT ATTTATGCCA ATCTGGGCGG CATCGTGGGT ATTACCCGCC
GGGCTGAAAG GGGCGAAGGA TGCCAGCTAC ACCATGTGGG TAGCGATGGC GGGCATGTGG
GGATGTCGGG TCATCGCAGG ATACATCCTC GGCGTGATGC TCGGCTTTGG CGTGATCGGC
GTGTGGATGG GTATGTTCTT TGACTGGATT GTGCGCGGAT TCTTCTATTA CCGCCGACTG
ATGAGCGGCC GCTGGCTATG GCGCTATCGT TCACCGACAG ATTGA
|
|---|
| Protein sequence | MRYLQDRFMK KLKDTDWYKK RYSNRVLFWR EISPLAFPIF IEGLCVVLMG VFSTFLVSWL
GKEAMAAVGL ADSFNMVIIA FFTAVALGTA VVVAFSLGQR NRKQARSAAR QSMSLLVLSS
FLLVALVEFA GSAIINLIAG QADEQVKTLA LTFLRWTVWG YPAVAIALVG CGALRGAGNT
KLPMVINIGM NILNIAISSL LIYGAFSWDG LGFIGAGIGI TISRYIGAIL VILTLMHGFN
GALRIPFRSY FAPFTVSILY EVLSIGIPAS IESVMFNIGK LITQRFVAGM GTEVIAGNFI
AFSISTLINL PGNSLGAAAT IIVGTRLGKG QIMQSTRQLK HIFWLSNIGL CALAVLSVPS
ASFLASFYTN EPEVIDVAKH LLWLNALFMP IWAASWVLPA GLKGAKDASY TMWVAMAGMW
GCRVIAGYIL GVMLGFGVIG VWMGMFFDWI VRGFFYYRRL MSGRWLWRYR SPTD
|
|---|
| |