| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2839 |
|---|
| Symbol | |
|---|
| ID | 8531243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3104015 |
|---|
| End bp | 3104437 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003260199 |
|---|
| Protein GI | 261822093 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00261887 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAAAGA TCAGATCAAA AGCAGTTTGT CTTTTCCGGA ATAATAACAA AATTCTATTA
GCTGAAGGGT ATGATCCCAT AAAAGATGAG CATTATGTGT TGCCACTCGG TGGTGGTATT
GAATTTGGCG AGTCGTCGCA GGCGGCTGCT GAGAGGGAAG TCCTGGAAGA AATTAGTGCC
GCAACCCAAG GTTTTTCGCT ATTGGGTGTT TCAGAAAATA TCTTTTCCTA CAATGGTAAA
CCGGGGCATG AAATTGTCTT TGTCTATGAA GCCCGTTTTC AGGATGAATC GCTTTATCAG
CAAGATATCA TTCATGGTAT CGAGACAAAT GGTGTTCCGA TTGTTACTCG CTGGTTTGAT
ATTGATTTGC TGCGATCCGG GAAAATCAAC TTTTATCCTC ACGGTATAGT AGACATGATC
TAG
|
|---|
| Protein sequence | MQKIRSKAVC LFRNNNKILL AEGYDPIKDE HYVLPLGGGI EFGESSQAAA EREVLEEISA
ATQGFSLLGV SENIFSYNGK PGHEIVFVYE ARFQDESLYQ QDIIHGIETN GVPIVTRWFD
IDLLRSGKIN FYPHGIVDMI
|
|---|
| |