| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2815 |
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| Symbol | |
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| ID | 8531219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3078402 |
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| End bp | 3079358 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | 23S rRNA pseudouridylate synthase C |
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| Protein accession | YP_003260175 |
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| Protein GI | 261822069 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000464709 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAG ATAATCCTTC AGTACAATTT GTGACGATCT CCGCAGATGA AGCGGGGCAG
CGTATCGATA ATTTTTTGCA TACCCACTTA AAGGGCGTGC CTAAAAGCCT GGTTTACCGC
ATCTTGCGAA AAGGTGAGGT AAGGATAAAT AAGAAACGGG TCAAGCCGGA GTATAAATTG
CTCGACGGTG ATGTCATTCG TATTCCGCCT GTGCGACAGG CCGAACGAGA TGAAACACCT
GTTTCCGCCA GTCTTGGCAA AGTGGCGGCA TTAACCGAGT GTATTATCTA TGAAGATGAC
TACCTGTTGG TGCTGAATAA GCCCTCGGGT ACGGCGGTAC ATGGCGGCAG TGGTTTGAGC
TTTGGTGTGA TTGAAGGGCT ACGTGCTTTA CGCCCAGAAG CGCGTTTTCT GGAGTTAGTA
CACCGCCTCG ATCGCGATAC TTCGGGCGTT TTGCTGGTAG CCAAAAAACG TTCGGCCTTA
CGGTCTCTAC ATGAACAACT GCGGCTGAAA GGTATGCAAA AAGACTATCT GGCGCTGGTT
CGCGGTCAAT GGCAGTCTCA CTGTAAGGCC GTTCAGGCGC CGCTGTTGAA AAATATCCTG
CAAAGCGGTG AACGCATAGT GCGGGTCAAC AGCGAAGGTA AACCGTCAGA AACACGTTTT
AAAATAGAAG AGCGTTTTGA ACATGCAACG CTAGTGCGGG CGAGCCCTGT TACCGGGCGT
ACACATCAAA TTCGTGTACA CGCCCAATAT GCTGGGCATC CCATCGCGTT TGATGATCGT
TACGGCGATC GCGAGTTCGA TCAGCAACTG GCGGACACGG GCTTAAAACG TCTCTTCCTG
CATGCACAGG CACTGCGTTT TGAGCACCCG AACACGGGTG AGACGCTGAG AGTCGAAGCC
CCATTGGATA GCGGGTTACG CCGCTGTCTG CAAGTGCTGC GCAAGACAAA AATCTAA
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| Protein sequence | MKTDNPSVQF VTISADEAGQ RIDNFLHTHL KGVPKSLVYR ILRKGEVRIN KKRVKPEYKL
LDGDVIRIPP VRQAERDETP VSASLGKVAA LTECIIYEDD YLLVLNKPSG TAVHGGSGLS
FGVIEGLRAL RPEARFLELV HRLDRDTSGV LLVAKKRSAL RSLHEQLRLK GMQKDYLALV
RGQWQSHCKA VQAPLLKNIL QSGERIVRVN SEGKPSETRF KIEERFEHAT LVRASPVTGR
THQIRVHAQY AGHPIAFDDR YGDREFDQQL ADTGLKRLFL HAQALRFEHP NTGETLRVEA
PLDSGLRRCL QVLRKTKI
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