| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2775 |
|---|
| Symbol | |
|---|
| ID | 8531179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3039571 |
|---|
| End bp | 3040608 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | vtamin B12-transporter permease |
|---|
| Protein accession | YP_003260135 |
|---|
| Protein GI | 261822029 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.574344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTAT TACCGCCGGG TGATATCACG CGAAAACACG CGATACCGTT GCCCAATTAC
ATCCAGCTAA AACAACAGCA GTGCAGACGC GATCGTCGGA GTCTGGCACT GCTGTTGGCG
TTTCTCGTGC TCACGCTGGT GGTAAGCCTG TGCGCCGGGG AACGCTGGAT TTGGCCGACA
GCCTGGCTGG ATGACGCTCA GCAACTCTTT GTCTGGCAAC TGCGGTTACC CAGAACGCTG
GCCGTGATGC TGGTGGGTGC TAGTCTGGCC ATGTCAGGTA CTGTCATGCA GGCCGTCTTT
GATAATCCGT TGGCTGAACC GGGGCTGCTG GGTGTCGCGA ACGGCGCAGG CGTCGCCTTA
GTGTTGACGG TGCTGCTGGG GCAGGGATTG TTGCCTGTCT GGATGTTAAG CCTGAGCGCC
ATTGCCGGTG CGCTACTGAT TACCTTTCTA TTACTCCATT TTGCCCGCCG TCATATTTCC
AATACCCGTT TGTTACTCAT CGGCATTGCG CTGGGAATTA TTTGTAGCGC GGTGATGACC
TGGGCGGTCT ATTTCAGTAC CAGCCTCGAT TTACGCCAAT TGATGTACTG GATGATGGGC
GGTTTCAGCG GCATTGACTG GCGGCACGGT TGGCTGATGT TGACGCTCTT ACCGCTGCTC
TTTTGGCTCA GCCGTCAGGG CACGGTGTTG AACGGACTGG CGCTGGGTGA GATTCAGGCG
CGTCAATTAG GCATCCCAGT TTATCGCTGG CGGACGATTC TCGTGCTGGT CATGGGCGTA
CAGGTCGGGC TGAGTGTGGC ACTGGCTGGT ATTATTGCGT TTATTGGATT GGTGATCCCT
CACATGTTGC GACTGTGTGG ACTGACCGAT CAGCGTTATT TATTGACCGG ATGTGCGCTA
GCTGGTGGAG GTGTTCTGCT GCTGGCAGAT ACGGTCGCGC GCGTTGCGCT GAGTTCAGCC
GAGTTGCCGA TAGGCGTGGT TACCGCTACG CTGGGATCGC CATGGTTTAT CTGGCTGTTA
TTACGCAATC GGCTGTAG
|
|---|
| Protein sequence | MQLLPPGDIT RKHAIPLPNY IQLKQQQCRR DRRSLALLLA FLVLTLVVSL CAGERWIWPT
AWLDDAQQLF VWQLRLPRTL AVMLVGASLA MSGTVMQAVF DNPLAEPGLL GVANGAGVAL
VLTVLLGQGL LPVWMLSLSA IAGALLITFL LLHFARRHIS NTRLLLIGIA LGIICSAVMT
WAVYFSTSLD LRQLMYWMMG GFSGIDWRHG WLMLTLLPLL FWLSRQGTVL NGLALGEIQA
RQLGIPVYRW RTILVLVMGV QVGLSVALAG IIAFIGLVIP HMLRLCGLTD QRYLLTGCAL
AGGGVLLLAD TVARVALSSA ELPIGVVTAT LGSPWFIWLL LRNRL
|
|---|
| |