| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2735 |
|---|
| Symbol | nrfA |
|---|
| ID | 8531139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 2989893 |
|---|
| End bp | 2991311 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | cytochrome c552 |
|---|
| Protein accession | YP_003260096 |
|---|
| Protein GI | 261821990 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTCT CCTATCTGTG GGGCATGGTA GCCAGTCTCT TTCTACTGAT GCCAGCCTAT
TCCGCTGATG TTCCGGCGCT GTCTTCCCCC GCCCCAATAG AAGCAAGAAA TTCAACGTTC
ATCAATCAAC ACCCCGATCA GTTCAACTCA TGGAAAGCGA CCAGCGAACA AGCTGAGCGC
CACGATGCGT TGGCAGAAGA CCCTATGATG GTGATCCTCT GGGCGGGTTA CCCCTTTTCC
AGAGACTATA ACAAGCCGCG CGGTCACGCT TATGCGTTAA CAGACGTGCG CGAAACGCTA
CGCACCGGTG CACCGAAGAC GGCGGAAGAT GGTCCGTTAC CAATGGCGTG CTGGAGCTGC
AAAAGCCCGG ATGTGGCGCG GTTGATCCAG CAAGAGGGTG AAGAAGGGTA CTTTAAAGGT
AAGTGGGCAC GAGGCGGGCC GGAGATTGCT AACGATCTCG GCTGTGCAGA CTGCCATGAC
ACCGCGTCAC CTGATTTTGC GCAGGGTAAA CCGGCGCTGA CGTTGTCCCG CCCTTATGCT
GAACGTGCGA TGGAAGCGAT TGGTAAGCCG TTTGATCAAA CCAGTCGGTT CGGACAGCAG
TCTATGGTCT GTGGGCAGTG CCACGTTGAG TATTATTTTT CCGGTAAAGA CAAGGCCGTG
AAGTTTCCAT GGGATAACGG TACGAAAGTC GAAGACATGG AGAAATATTA TGATGCTATC
TCCTTCTCCG ACTGGACCAA CCCTCTTTCC CGTACACCGA TGCTGAAAGC TCAACATCCA
GAGTATGAAA CCTGGAGCAT CGGTATCCAC GGTAAAAACA ACGTGACCTG TATCGACTGC
CATATGCCGA AAGTGAAAAA TGCAGACGGC AAGCTGTACA CCGATCACAA GATAGGTAAC
CCCTTCGATA AGTACGGCGA AACCTGTACC AATTGCCACA CGCAGGATAA AGCGGCAATG
CAGGCGGTTG TCGCCGAGCG TAAAACGGCT ATTCAGGAAT TAAAACTGAA AGCAGAAGAG
CAACTGGTGC ATGCGCATTT TGAGGCTAAA GCGGCCTGGG ATGCCGGTGC AACCGAAGCT
GACATGCAGC CAATTCTTAT GGATATCCGC CATGCGCAGT GGCGCTGGGA TCTGGCCGTC
GCCTCTCACG GCATTCACAT GCATGCGCCG GACGAAGGTT TACGGATGCT CGGCACCTCG
CTGAGTAAAT CCGCTGAAGC GAGAACCAAG CTGGTGCGTC TGCTGGCTCA GAAAGGGGTG
ACTGGCGAAG TCAAACTGCC GGATATCTCG ACGAAAGAGA AAGCGCAGCA GGCGATCGGG
CTCAACATGC AGCAAATAAA AGCCGAGAAA CAGGATTTCC TGAATACGGT GGTGCCGCAG
TGGAATGAGC AAGCGCGTAA AGCTGGACGA CTGAACTAA
|
|---|
| Protein sequence | MSVSYLWGMV ASLFLLMPAY SADVPALSSP APIEARNSTF INQHPDQFNS WKATSEQAER
HDALAEDPMM VILWAGYPFS RDYNKPRGHA YALTDVRETL RTGAPKTAED GPLPMACWSC
KSPDVARLIQ QEGEEGYFKG KWARGGPEIA NDLGCADCHD TASPDFAQGK PALTLSRPYA
ERAMEAIGKP FDQTSRFGQQ SMVCGQCHVE YYFSGKDKAV KFPWDNGTKV EDMEKYYDAI
SFSDWTNPLS RTPMLKAQHP EYETWSIGIH GKNNVTCIDC HMPKVKNADG KLYTDHKIGN
PFDKYGETCT NCHTQDKAAM QAVVAERKTA IQELKLKAEE QLVHAHFEAK AAWDAGATEA
DMQPILMDIR HAQWRWDLAV ASHGIHMHAP DEGLRMLGTS LSKSAEARTK LVRLLAQKGV
TGEVKLPDIS TKEKAQQAIG LNMQQIKAEK QDFLNTVVPQ WNEQARKAGR LN
|
|---|
| |