Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2723 |
Symbol | |
ID | 8531127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2979600 |
End bp | 2981555 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | cytochrome c-type biogenesis protein CcmF |
Protein accession | YP_003260084 |
Protein GI | 261821978 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCCTG AAGTGGGCAA CTATCTGCTC TGTCTGGCGC TGGGTGTTGC GCTGTTGCTC AGCGTGTATC CACTGTGGGG CGCGTCGCGT CAGGATGAAC GCCTGATGGC GCTGGCGCGT CCTCTTTCCT GGGTACTGTT CGCATGCATT TTGGCGTCCT TCCTCGTGCT GGTTCATGCG CTGGTGATCA ATGATTTCAC CGTCCTCTAT GTAGCAAATA ACTCGAACCG TGCGCTGCCG GTATGGTATC GCGTTGCCGC GGCATGGGGG GCACATGAAG GATCGCTGCT GCTCTGGGTT CTGTTAATGA GCGGTTGGAC CTTCGCCGTG GCGGTCTTCA GCCGAGGAAT GTCGCTGGAT GCGGTCGCCC GGGTTCTAGC CGTCATGGGG ATGATTAATG TCGGCTTCCT GCTGTTTATC ATCCTGACGT CGAATCCCTT TACGCGCACG CTTCCGGACT ATCCGATTGA CGGACGCGAT CTCAACCCGC TATTGCAGGA TGTCGGGTTA ATCTTTCACC CTCCGCTGCT TTACATGGGC TATGTCGGGT TTTCCGTGGC GTTTGCGTTT GCGGTCGCCT CGCTGCTGGC CGAGCGACTG GATAGCGCGT GGGCTCGCTG GTCCCGACCG TGGACACAGG CGGCTTGGTC ATTCCTGACG CTGGGTATCG TGCTGGGATC TGGCTGGGCG TATTACGAGC TGGGGTGGGG CGGCTGGTGG TTCTGGGATC CGGTGGAAAA TGCTTCATTG ATGCCGTGGC TGGTGGGCAC GGCGCTGCTG CATTCGCTGT CGGTTACCGA GAAACGCGGC AGCTTTAAGG CCTGGACGGT ACTGCTGGCT ATCGGCGCGT TCTCGCTCTG CCTGCTGGGA ACCTTTCTGG TGCGTTCCGG CGTGCTGGTA TCGGTGCACG CGTTTGCCTC CGATCCGGCG CGCGGCATGT TTATTCTCGC GTTTTTGGTC ATTGTCATCG GCGGTTCTTT GCTGCTGTTC GCTATCAAAG GTAATAGAGT GCGGGCACGG GTAACGAACT CACTCTGGTC GCGTGAAACT TTTCTGCTCG GCAATAACCT GATTCTGATG GCGGCCACGC TTGTTGTGCT GTTAGGAACG CTGCTGCCGT TGGTGCATAA GCAGTTGGGG TTGGGCAGCA TTTCGATTGG TGCACCGTTC TTCAATACGA TGTTTACCCT GTTAATGGCA CCTTTTGCCC TGCTGCTGGG CGTGGGGCCA CTGGTTCGCT GGCGGCGCGA TGAACCACAA AAGCTGCGCA AACTGCTGCT GGTGGCGATG GCCGTGACGG CGGCCCTGTC GCTGCTGCTT CCGTGGCTGT TACAGGATTC CCTTGTTGCC ATGACGGTGG TCGGTCTGTC GATGGCGCTG TGGGTATTTT TCTTAACAGT GTACGAACTG CATAGCAATT CCACCCGACG CCACGGTCTG CTGCGCGGTT TGACCACGCT TTCACTGAGC CAGTGGGGCA TGGTGTGCGG CCATATTGGG CTGGCGGTGA CGGTGGTAGG TATCGCATTC AGCCAGAATT ATAGCGTTGA GCGAGATGTG CGGATGCGGG CAGGCGACAG CATACAGATC CATGATTACC GTTTTACGTT TCAAGGTGTG CAGGATGTCG TGGGGCCGAA CTGGCACAGC GGTAAAGGGA CGATCGAGGT CACGCGCAAC GGCAAGCCGG AGGCGATCCT GACGGCGGAA AAACGTTTCT ATAACACCAG CGGTGCGATT ATGACGGAAG CGGCGATTGA TGCCGGTGTG ACGCGCGATC TTTACGCGGC CTTAGGCGAA GAGTTGGATG ACGATAGCTG GGCGGTAAGA CTGTATTACA AACCCTTTAT CCGCTGGATT TGGTATGGCG GTGGGCTGAT GGCGCTAGGG GGTATTCTGT GCATGTTTGA TCCGCGTTAT CGCCTGCGTC GTGCCGTGAG GGAGATATCA TCATGA
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Protein sequence | MMPEVGNYLL CLALGVALLL SVYPLWGASR QDERLMALAR PLSWVLFACI LASFLVLVHA LVINDFTVLY VANNSNRALP VWYRVAAAWG AHEGSLLLWV LLMSGWTFAV AVFSRGMSLD AVARVLAVMG MINVGFLLFI ILTSNPFTRT LPDYPIDGRD LNPLLQDVGL IFHPPLLYMG YVGFSVAFAF AVASLLAERL DSAWARWSRP WTQAAWSFLT LGIVLGSGWA YYELGWGGWW FWDPVENASL MPWLVGTALL HSLSVTEKRG SFKAWTVLLA IGAFSLCLLG TFLVRSGVLV SVHAFASDPA RGMFILAFLV IVIGGSLLLF AIKGNRVRAR VTNSLWSRET FLLGNNLILM AATLVVLLGT LLPLVHKQLG LGSISIGAPF FNTMFTLLMA PFALLLGVGP LVRWRRDEPQ KLRKLLLVAM AVTAALSLLL PWLLQDSLVA MTVVGLSMAL WVFFLTVYEL HSNSTRRHGL LRGLTTLSLS QWGMVCGHIG LAVTVVGIAF SQNYSVERDV RMRAGDSIQI HDYRFTFQGV QDVVGPNWHS GKGTIEVTRN GKPEAILTAE KRFYNTSGAI MTEAAIDAGV TRDLYAALGE ELDDDSWAVR LYYKPFIRWI WYGGGLMALG GILCMFDPRY RLRRAVREIS S
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