| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2685 |
|---|
| Symbol | |
|---|
| ID | 8531087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 2937979 |
|---|
| End bp | 2938794 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003260048 |
|---|
| Protein GI | 261821942 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCTTGA TCAATCGCTC CCCCAGCCGA GGCGGACGGC TGCTGCTTGT CCTGCTGCCG
TTTACCGTGC TGCTGGTGCT GTACCTCGTG GGGTCAGCGC TACGACTGGA AGCTAATCCC
AATGACAAAC TGCTGCCAAG TCTTGGGCAA ATGGCCGAGG CGATTCAGCG CATGGCATTG
ACCGAAGACA AACGTAGCGG TGACTACCTG TTCTGGCTGG ATACGCAGGC CAGTCTGGTG
CGTCTCGCGC TGGGACTGGG GATCGCCAGC CTGTTGAGCC TGTTGTTTGG GATTGCAGCA
GGGGCTTTTC CGCTGTTCCG TGCGTCGCTC TCGCCGTTGA TGACGGTGCT GTCGATGATC
CCGCCGCTGG CGATTTTACC GATTCTTTTC ATCGTCTTCG GATTGGATGA ACTCTCGAAA
GTGATGCTGA TCGTCATTGG TGTTACGCCG ATGTTGGCGC GCGATCTCGA ACAGCGAGCC
CGCAATATCC CACAGGAAAT GCTGATCAAA GCACAGACGC TGGGGGCGAA CAGTTGGGTG
GTAGTGTTGC GCGTCATTCT GCCGCAACTG CTGTCACGGC TGTTGATTTC CCTGCGGCTG
CTGCTGGGCG CGGCGTGGCT GTTCCTCATC TCTGCCGAAG CGATTTCAGC AACGGCGGGG
CTGGGCTACC GCATCTTTCT GGTACGTCGC TATTTGGCGA TGGACGTGAT TCTGCCTTAC
GTAGTGTGGA TCACGCTGCT GGCATGGTTG ATGGATATGG TACTGCGCTG GCTGCATCGC
CGCTGGTTCC CGTGGTCAGA GGAAAGCAAA GCATGA
|
|---|
| Protein sequence | MRLINRSPSR GGRLLLVLLP FTVLLVLYLV GSALRLEANP NDKLLPSLGQ MAEAIQRMAL
TEDKRSGDYL FWLDTQASLV RLALGLGIAS LLSLLFGIAA GAFPLFRASL SPLMTVLSMI
PPLAILPILF IVFGLDELSK VMLIVIGVTP MLARDLEQRA RNIPQEMLIK AQTLGANSWV
VVLRVILPQL LSRLLISLRL LLGAAWLFLI SAEAISATAG LGYRIFLVRR YLAMDVILPY
VVWITLLAWL MDMVLRWLHR RWFPWSEESK A
|
|---|
| |