Gene Pecwa_2679 details

Gene Information

• Locus tag: Pecwa_2679
• ID: 8531081
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2931191
• End bp: 2931886
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 56%
• Product: protein of unknown function DUF162
• Protein accession: YP_003260042
• Protein GI: 261821936

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAACC GAGATAATTT TCTGGCCGAG ATTGCCCGTC AGCTTGGCCG CAAGGTGCGC 
CATATTCCTG CTCCGCTACC CAGGCCAGCA AGCCATCATG CCCGCACCCG ATTAACCGAT 
CTAACCGTAC AGCAGCGTTG TGATGCGTTT ATCGATGTCG CCACTAACGT CATGCTGGCA 
CACTGCGAAA TCACCAGTGA AGCTGACGCA GCGCAGGCTG CGCTCCGATT GTGCGATAAA 
TACGGCCACG CGCCCGTTAT CATCAGCGAC GATCGGCGTT TAGCAGCATT AGGGATCACC 
GCGTGTTTGC AGCGTGAGTG TCAGGCCAGC GTATGGGATC CCAGCGTGGG AGAAGAAAAC 
CTGCGGCTGG CGGAGCAAGC CAAAGTCGGC GTAGTTTACG CGGAATATGG CCTAACCGAA 
TCAGGCGGTG TGGTGCTATT TTCCGCACCA CAACGAGGAC GCGCCGTCAG CCTGTTGCCG 
GAATCCTCTC TTTTTGTGCT GCGCAAAAGC ACAGTGTTAC CCCGTATCGC GCAGTTGGCG 
CAGCACCTGC ATCATATGGC GCAACAAGGT GAGCGTATGC CATCGTGCAT TAACATTATT 
GGCGGCCCAA GCTCCACCGC CGATATTGAA CTGATCAAAG TGGTCGGCGT ACACGGGCCG 
GTTAACGCCG CCTATTTGAT CGTTGAGGAC TGTTAA 

 

Protein sequence

MENRDNFLAE IARQLGRKVR HIPAPLPRPA SHHARTRLTD LTVQQRCDAF IDVATNVMLA 
HCEITSEADA AQAALRLCDK YGHAPVIISD DRRLAALGIT ACLQRECQAS VWDPSVGEEN 
LRLAEQAKVG VVYAEYGLTE SGGVVLFSAP QRGRAVSLLP ESSLFVLRKS TVLPRIAQLA 
QHLHHMAQQG ERMPSCINII GGPSSTADIE LIKVVGVHGP VNAAYLIVED C