| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2671 |
|---|
| Symbol | |
|---|
| ID | 8531072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2920343 |
|---|
| End bp | 2921194 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_003260034 |
|---|
| Protein GI | 261821928 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.179494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTAT TTATTACTCT TTTTATATTA TTTTTCAGCA ACCTATCCCT GAACATCGTT
CAGGCTGCGC CGCATACCCC GCATTCTGCA CCGAAGAAAA GCACCATTGA AGAAACGAAT
AAGAAAGGTC GTCAAACAAA GGGTAATGCT AAATCACCGA CGCCAATCAA AAGCAAAAAG
CCAGAACCCA TCGCAGTCAG CAATAAAACC AAATCTCGCA CGGCTAACAA ATCGACAGAA
AAGGCATCAT CACGGACGCA AGGCAACACA CCTGCGCTAG TGAGAAAAAA CCTTAAAAAG
CTGAAATCTG GAGAAGATAA GCAAACAATC GCACAGACCA GAGTCAAAAC CGGGTTGAAG
AAGGCCACGC TCAAAGGGAA AGTGGATAAA GAGCCACCAA CCACAGAAAA AGGGATGACG
CTGAGTGCGG CACATAAAAA ACGCTATCAG CACGCCAAAA CGACAGCAAT GAATAAGTTG
ATGAGCCAGA TCGGTAAACC TTACCACTGG GGCGGTTCAT CTCCTTTTAC CGGATTCGAC
TGTAGCGGAC TGGTCTATTA CGCGTATAAA GATGTCGTTA AGATCCAAAT CCCACGCACC
GCAAACGAAA TGTACCATCT GCGTGATGCC GCGCCGATTA AAAAGAGTGA TCTGGAAAGT
GGCGATCTGG TCTTCTTCCG CATCAATAAT CGTGGTGCGG CCGATCACGT CGGGGTTTAT
CTGGGGGAAG GCAAATTTAT CCAGTCACCG CGTACAGGTT CAGATATTCG TATCAGCAAG
CTAAGTGAAG ATTATTGGCA GGAGCACTAT GTTGGCGCGC GTCGCGTAGT GACACCACAG
ACGATTCGTT AA
|
|---|
| Protein sequence | MRLFITLFIL FFSNLSLNIV QAAPHTPHSA PKKSTIEETN KKGRQTKGNA KSPTPIKSKK
PEPIAVSNKT KSRTANKSTE KASSRTQGNT PALVRKNLKK LKSGEDKQTI AQTRVKTGLK
KATLKGKVDK EPPTTEKGMT LSAAHKKRYQ HAKTTAMNKL MSQIGKPYHW GGSSPFTGFD
CSGLVYYAYK DVVKIQIPRT ANEMYHLRDA APIKKSDLES GDLVFFRINN RGAADHVGVY
LGEGKFIQSP RTGSDIRISK LSEDYWQEHY VGARRVVTPQ TIR
|
|---|
| |