Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2666 |
Symbol | |
ID | 8531067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2917102 |
End bp | 2917539 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | transcriptional regulator SlyA |
Protein accession | YP_003260029 |
Protein GI | 261821923 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0001523 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATTGC CATTAGGATC TGATTTAGCT CGTCTGGTGC GCGTGTGGCG TGCACTGGTC GATCACCGAT TAAAACCACT TGAACTGACT CAGACGCATT GGGTCACGTT GCATAACATA TACCACTTAC CCCCCGGCCA GTCGCAGATT CAATTGGCTA AAGCAATCGG TATTGAGCAA CCCTCATTAG TCCGAACATT GGATCAACTT GAGGAGAAGG GGTTAATCAC TCGCCACGTT TGTGCTCACG ATCGTCGGGC AAAACGTATT ATGCTGACCG AATCAGCAGA ACCAATAATA CAGGCAGTCA ATGGTGTAAT TAGTCATACA CGAAGTGAGG TGTTATTTGG AATTACGCCG GAACAGGTTG ATGAATTAGC GTTGTTGGTT GCGCGTCTTG AGAAAAATAT ATTGGCATTA CATGAAAATC AAGTGTAA
|
Protein sequence | MELPLGSDLA RLVRVWRALV DHRLKPLELT QTHWVTLHNI YHLPPGQSQI QLAKAIGIEQ PSLVRTLDQL EEKGLITRHV CAHDRRAKRI MLTESAEPII QAVNGVISHT RSEVLFGITP EQVDELALLV ARLEKNILAL HENQV
|
| |