Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2654 |
Symbol | |
ID | 8531055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2903035 |
End bp | 2904669 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003260017 |
Protein GI | 261821911 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.411058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGATG TAATCAAAAA ACGTTTTAAA CACTCGTTGC TACTGCTTAC TTTGTGTGCC GCGGGGGCGA TAACCTCGGT TTTTGCTGCC CAGGTTCCCG CCGGTGTGGT ATTGGCGGAC AAGCAAGAGC TGGTACGAGG TAATAGTTCA GAGCCTGCTT CGTTGGATCC GCATAAGGTA GAAAGCGATG TAGAAGGCCA TATTATCAAC GACTTCTTCG ATAATCTGGT GCGTGTGAGT GATGACGGCA CGATACAGCC GCGACTGGCC GAACGTTGGG ATAGTAAAGA CAACACGGTG TGGACGTTCC ACCTGCGGCC CGATGTCAAA TGGTCTGATG GTTCGCCGCT GACCGCCGAC GATGTGGTTT ACAGTTGGCG ACGCCTTGGC GATCCTAAAA CGCTGTCGCC TTATGGCAGC TATATCGCCA GTATGTACGT GAAGAATGCG GCAGATATTA TGGCGGGCAA AAAGGCACCA GATACGCTGG GCATAAAGGC GCTGGATAGC CATACCGTTG AAGTTACGCT GGAACGTCCG CTTTCCTATT TCCTGGAAAT GTCGGCTTAC CATGTGTTGG TGCCATTGCC GAAAGCGGTT CTTGAAAAAT ACCCAGAAAA TTGGACGCAG GTCGGGCATT TTGTCAGCAG TGGCCCTTAT ACGATGAGTG AATGGGTGGT GAACGAACGC ATCGTCGGCA AGCGCAATAG CCAGTATTGG GATGATGCGC ATACTGTGAT TAACAAAGTC ACGTACCTGC CGATTAGCTC GCAGGCGGCG GAACTGAATC GTTATAAATC GGGTGAAATT GATATCACGG GGCTTTTATC GCCCGTGCAG TTTGCGTCGC TGCAAAAAGA GTATCCGCAG GAGGTGAAAG TTTCGCCGCT GTTGTCTACC TACTTCTATC AGTTCAATAC GCAAAAACCG CCGTTTGATG ATGTTAGAGT GCGCCGTGCC TTAGACCTGA GTTTGGATAA GACGGTTATC GCTGAAAAAG TGATGGGCAT GGGGCAGAAA CCCGCATATA GCCTGGTTCC TCAAAACACC GGAGGCTATA CGCGACAGGA GCCAGAATGG GCCGGCTGGA CGCAAGAACA GCGTAATGCA GAAGCGAAAA AATTACTGGA AGAGGCTGGT TTTAACGCGA AAAACCCGCT GCGGTTCAAT CTGCTTTATA ACACATCAGA ATCGCATCTA CGTGTTGCTA TCGCGGCGAA TTCAATGTGG AAAAAGAACC TCGGCGTAGA GGCGACATTA CAGAATCAGG AATGGAAAAC CATGCTGGAT ACGATCCGTT CCGGTACCTA TGAGGTGGTT CGCTATTCAT GGAACGGTGA TTACAATGAG CCGAGTACCT TTCTGGAAAT TCTGCAATCG GGTAACAGCA ACAACAATTC TAAATTCAGT AACGCGGAAT ATGATGCGTT ACTGCAAAAA GCGCTAACGG TAGACAGTCG GCAGGAAAGG CAGGGGATTT ATCAGCAGGC AATGACGATT CTGAACCAGC AGATGCCACT ACTGCCGATT TATTATTATG TCCAGCCACA GATGGTGAAA CCTTACATCG GTGGTTTTTT GCCCGACATC CGTGGTAATT ACTACACACA GGATATATAT GTGATTAAAC AGTAG
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Protein sequence | MNDVIKKRFK HSLLLLTLCA AGAITSVFAA QVPAGVVLAD KQELVRGNSS EPASLDPHKV ESDVEGHIIN DFFDNLVRVS DDGTIQPRLA ERWDSKDNTV WTFHLRPDVK WSDGSPLTAD DVVYSWRRLG DPKTLSPYGS YIASMYVKNA ADIMAGKKAP DTLGIKALDS HTVEVTLERP LSYFLEMSAY HVLVPLPKAV LEKYPENWTQ VGHFVSSGPY TMSEWVVNER IVGKRNSQYW DDAHTVINKV TYLPISSQAA ELNRYKSGEI DITGLLSPVQ FASLQKEYPQ EVKVSPLLST YFYQFNTQKP PFDDVRVRRA LDLSLDKTVI AEKVMGMGQK PAYSLVPQNT GGYTRQEPEW AGWTQEQRNA EAKKLLEEAG FNAKNPLRFN LLYNTSESHL RVAIAANSMW KKNLGVEATL QNQEWKTMLD TIRSGTYEVV RYSWNGDYNE PSTFLEILQS GNSNNNSKFS NAEYDALLQK ALTVDSRQER QGIYQQAMTI LNQQMPLLPI YYYVQPQMVK PYIGGFLPDI RGNYYTQDIY VIKQ
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