| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2608 |
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| Symbol | |
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| ID | 8531009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2850125 |
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| End bp | 2850490 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | DNA-binding transcriptional activator PspC |
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| Protein accession | YP_003259971 |
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| Protein GI | 261821865 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0232042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATA CATGGTCAGG TAAAACGTTA TACCGCATAC CGGAAGAAGG GATGCTGAAA
GGAGTTTGTG CTGGTTTAGC ACGTTATTTT GACGTGCCGG TGAAACTCCT GCGGGTAATC
GTTGTGCTGT CGATGTTTTT CGGCCTGTTC TTTTTCACCA TCGTGGCCTA CATCATCCTG
ACGTTTATGC TTGATCCGGC ACCGGCAGGG ACGGGGTTTG AGGATGAAAA GTCAGCCCGG
ACACCCAGCC AACTGCTGAA TGAGGCTGAC GCAACATTGC AGGCCAGCGA ACAGCGCCTG
CGTAGCATTG AACGCTACGT CACCTCGGAT ACATTTGGCG TTCAGAACCG CTTTCGTCAT
CTGTAA
|
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| Protein sequence | MKNTWSGKTL YRIPEEGMLK GVCAGLARYF DVPVKLLRVI VVLSMFFGLF FFTIVAYIIL
TFMLDPAPAG TGFEDEKSAR TPSQLLNEAD ATLQASEQRL RSIERYVTSD TFGVQNRFRH
L
|
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