Gene Pecwa_2602 details

Gene Information

• Locus tag: Pecwa_2602
• ID: 8531003
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2842735
• End bp: 2843454
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 55%
• Product: murein peptide amidase A
• Protein accession: YP_003259965
• Protein GI: 261821859

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAACA CGATCCTTTC TCTTCACGCT CGCCAGCGCA GAGGTAACTT GCCTTCGCTG 
GGCGAACCTT ACGGAAAATC GCTGCTGGGT GCGCCATTAC TCTACTTCCC AGCCGAACTG 
GTGCCTTCAG AGAGCGGGTT GATTATTGCT GGCACACACG GTGATGAAAC CGCCGCAATC 
GTCGCGCTTT CCTGCGCGCT TCGTACCCTC TTTTCAGGCC AGAGACGCCA TCACGTTGTG 
CTTGCAGTCA ATCCAGACGG CTGTCAGTTG GGTCTGCGTG CCAACGCTAA CGGCGTCGAT 
CTCAATCGCA ATTTCCCAGC CAGCAATTGG CAACCGGGGA GCACGGTTTA TCGCTGGAAT 
AGCGCCGCAG AGGAACGTGA TGTCGAATTA TCCACGGGGG AAACCGCGGG CTCCGAACCG 
GAAACGAAAG CCCTTTGCAC GCTGATTGAG AAACTTAATC CGCGCTGGGT TGTCTCTTTT 
CATGAACCAC TCGCCTGTAT TGAAGATCCA CACCGTTCCG AACTGGGCCA ATGGTTAGCG 
CAGCAGTGTG AGCTGCCGTT AGTATCGAGT ATCGGTTACG ACACTCCGGG CTCTTTCGGA 
AGTTGGTGCG CCGATCGTTC GCTCCATTGC ATTACCGCTG AACTTCCACC GATCTCGGCT 
GATGCAGCCA GTGAATGCTA CCTGAAAGCG ATGGTCGCGT TGCTAAACCA GCAATTTTAA 

 

Protein sequence

MENTILSLHA RQRRGNLPSL GEPYGKSLLG APLLYFPAEL VPSESGLIIA GTHGDETAAI 
VALSCALRTL FSGQRRHHVV LAVNPDGCQL GLRANANGVD LNRNFPASNW QPGSTVYRWN 
SAAEERDVEL STGETAGSEP ETKALCTLIE KLNPRWVVSF HEPLACIEDP HRSELGQWLA 
QQCELPLVSS IGYDTPGSFG SWCADRSLHC ITAELPPISA DAASECYLKA MVALLNQQF