| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2563 |
|---|
| Symbol | |
|---|
| ID | 8530964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 2795651 |
|---|
| End bp | 2797231 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | nitrate reductase, beta subunit |
|---|
| Protein accession | YP_003259930 |
|---|
| Protein GI | 261821824 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.219969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC GTTCACAAGT GGGCATGGTG CTGAATCTGG ACAAATGCAT CGGCTGTCAC
ACCTGCTCCG TTAGCTGTAA AAACGTCTGG ACCAGCCGTG AAGGGATGGA ATACGCCTGG
TTCAACAACG TCGAAACCAA GCCGGGCGTG GGCTATCCCC ATGCCTGGGA AGATCAGGAA
AAGTGGAAGG GCGGCTGGAT CCGTAAAATC AGCGGCAAAC TTGAACCGCG GATGGGTAAC
CGTATCAGCG TGTTGTCCAA AATTTTTGCT AACCCTGATG TGCCAGAAAT CGACGACTAC
TATGAACCGT TCGACTACGA CTATCAGAAC TTGCGTAAAG CGCCAGAAGG TAAGCATCAG
CCTGTCGCCC GTCCGCGCTC GCTGATTACC GGTCAGCGGA TGAAGAAAAT CGAGAACGGC
CCGAACTGGG AAGACGATCT GGGTGGTGAA TTCAGTAAAC GCTCTGAGGA TAAGAACTTC
GATCCTGTCC ATTTCAACGA AATGCAGAAA GAGATGTACG GCCAGTTCGA AAACACGTTC
ATGATGTATC TGCCGCGTCT GTGCGAACAC TGTTTGAACC CGGCGTGCGT GGCAACCTGT
CCGAGCGGCG CGATCTACAA ACGCGGCGAA GACGGTATCG TTCTGATCGA TCAGGACAAG
TGTCGCGGCT GGCGGATGTG TCTGACCGGT TGTCCGTACA AGAAAATCTA CTTCAACTGG
AAGAGCGGAA AATCAGAAAA ATGTATTTTC TGCTACCCGC GTATTGAAAG CGGTCAGCCA
ACGCTGTGTT CAGAAACCTG CGTCGGGCGT ATCCGCTATC TGGGCGTGCT GCTCTATGAT
GCCGATCGCA TCGAACAAGC GGCTGCGGTA GAAAACGAGA AAGATCTGTA CCAGAGCCAA
CTGGATGTGT TCCTTGACCC GCATGACCCG AAAGTCATTG AGCAAGCGCT GAAAGACGGT
ATTCCAAACA GCGTGATTGA CGCGGCGCAG AAATCACCTG TTTACAAAAT GGCGATGGAT
TGGAAACTGG CGCTGCCGTT GCACCCGGAA TACCGCACGC TGCCGATGGT GTGGTACGTG
CCGCCGTTGT CACCGATTCA GTCTGCGGCG GATGCGGGTC AATTGGCGCA CACCGGCGTA
CTGCCGGATG TAGAAAGTCT GCGTATTCCG GTGCAGTACC TGGCGAACCT GCTGACCGCA
GGGGATACCG AACCTGTCTT ACTGGCCCTG AAACGTATGC TGGCAATGCG CCACTATAAA
CGTGCAGAAA GCGTAGAAGG CAAGATCGAT ACCAGCGCGC TGGAGCAGGT TGGGCTGACA
GAAGCACAGG CGCAGGAAAT GTACCGCTAT CTGGCGATTG CGAACTACGA AGACCGTTTC
GTGATCCCGT CAAGCCATCG TGAACTGGCG CGTGAAGCCT TCCCTGAAAG CAAAGGCTGC
GGCTTCAGCT TTGGCGATGG TTGCCACGGC AGCGATACCA AATTCAACCT GTTCAACAGC
AAGCGTATTG ATGCCATCGA TGTCAGCAAC AAAACGCGTG ATATGAACAG CAAAATCATG
CGGGAGACTA ACCATGATTA G
|
|---|
| Protein sequence | MKIRSQVGMV LNLDKCIGCH TCSVSCKNVW TSREGMEYAW FNNVETKPGV GYPHAWEDQE
KWKGGWIRKI SGKLEPRMGN RISVLSKIFA NPDVPEIDDY YEPFDYDYQN LRKAPEGKHQ
PVARPRSLIT GQRMKKIENG PNWEDDLGGE FSKRSEDKNF DPVHFNEMQK EMYGQFENTF
MMYLPRLCEH CLNPACVATC PSGAIYKRGE DGIVLIDQDK CRGWRMCLTG CPYKKIYFNW
KSGKSEKCIF CYPRIESGQP TLCSETCVGR IRYLGVLLYD ADRIEQAAAV ENEKDLYQSQ
LDVFLDPHDP KVIEQALKDG IPNSVIDAAQ KSPVYKMAMD WKLALPLHPE YRTLPMVWYV
PPLSPIQSAA DAGQLAHTGV LPDVESLRIP VQYLANLLTA GDTEPVLLAL KRMLAMRHYK
RAESVEGKID TSALEQVGLT EAQAQEMYRY LAIANYEDRF VIPSSHRELA REAFPESKGC
GFSFGDGCHG SDTKFNLFNS KRIDAIDVSN KTRDMNSKIM RETNHD
|
|---|
| |