| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2556 |
|---|
| Symbol | |
|---|
| ID | 8530957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2789550 |
|---|
| End bp | 2790524 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | serine/threonine dehydratase |
|---|
| Protein accession | YP_003259923 |
|---|
| Protein GI | 261821817 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.867257 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACT TACGTCTCCC AACCTTCGAC GATGTGGTAG CCGCAGCGGA ACGTATTGCT
GGCTATGCCA ATAAAACGCC AGTGATGACA TCGCGCACCG TCAATGACGC CTTTGGCGCT
GAGCTTTTCT TCAAGTGTGA AAACTTTCAG CGTATGGGCG CATTTAAGTT TCGCGGTGCC
ATGAACGCGC TGTTGCAGTT CTCAGATGAG CAGAAAGCCG CAGGCGTTGT CACCTTTTCT
TCCGGTAACC ATGCGCAGGC CATCGCGCTT TCTGCCAAAT TACTCGGCAT TCCGGCAACG
ATTGTTATGC CGCATGATGC ACCGGCGGCA AAGGTCGCAG CAACGCGCGG CTATGGTGGG
AACGTGGTGG AATACAATCG ATATACCGAA GATCGTGAGC AGATCGGCAG GGATCTGGCC
GAAAGGCAGG GTCTGACGCT CATTCCCCCT TACGACCACC CTCACGTCAT TGCTGGACAA
GGCACGGCCG CGAAAGAACT GCTGGAAGAA ACCGGTGAGC TGGACGCCCT GTTCGTCTGT
TTGGGTGGCG GCGGATTGTT GGCGGGCTCC GCTCTTTCTG CTCGTCAGTT GTCTCCTCGC
TGTAGAATTT ATGGCGTCGA GCCTCTCGCG GGCAACGATG GGCAGCAATC TTTCCGCAGC
GGCAACATTG TGCATATCGA TACGCCCAAA ACCATCGCCG ATGGCGCACA GACCCAGCAC
CTAGGTAACT ACACCTTCCC TCTGATTCAC CAAAATGTCG ACGATATTCT AACCGTAACG
GATGACGACC TGATTGATAC CATGCAGTTT TACGCCGAAC GCATGAAGAT TGTCGTTGAG
CCGACTGGGT GCCTTAGCTT CGCGGCAGCG CGCAATCTCA GTGAATCGCT ACGCGGTAAA
CGCATCGGTA TTATTATCAG CGGTGGAAAT GTCGATATCA GCCGCTATGG TGCATTTCTG
ACCGGCAATG CTTAA
|
|---|
| Protein sequence | MSDLRLPTFD DVVAAAERIA GYANKTPVMT SRTVNDAFGA ELFFKCENFQ RMGAFKFRGA
MNALLQFSDE QKAAGVVTFS SGNHAQAIAL SAKLLGIPAT IVMPHDAPAA KVAATRGYGG
NVVEYNRYTE DREQIGRDLA ERQGLTLIPP YDHPHVIAGQ GTAAKELLEE TGELDALFVC
LGGGGLLAGS ALSARQLSPR CRIYGVEPLA GNDGQQSFRS GNIVHIDTPK TIADGAQTQH
LGNYTFPLIH QNVDDILTVT DDDLIDTMQF YAERMKIVVE PTGCLSFAAA RNLSESLRGK
RIGIIISGGN VDISRYGAFL TGNA
|
|---|
| |