Gene Pecwa_2540 details

Gene Information

• Locus tag: Pecwa_2540
• ID: 8530941
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 2768317
• End bp: 2769051
• Gene Length: 735 bp
• Protein Length: 244 aa
• Translation table: 11
• GC content: 53%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003259907
• Protein GI: 261821801

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0960196
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCGC AAAAAACGTT ACTGCTGACC GGTGCCAGCC GGGGGATTGG ACATGCTACC 
GTTAAGCATT TCCACGCGGC AGGGTGGCGG ATCTTTACCG CTTCACGTCA GAACTGGGCA 
GAAGAGTGCC CGTGGGCGGA AAAGCTACTC AATCATATTC ATCTCGATTT GGAGGATATT 
GATAGCCTGC AACAGACGCT GCCGCTGATT AAGGAAAAAC TGGGTGGGCG GTTGGATGCG 
TTAGTCGATA ACGCGGGGAT TTCGCCAAAA GGGGAAGGTG GGCAACGTCT TGGCATACGC 
GACACGGACT ATGCTACCTG GCTGCGTGTT TTCAACGTCA ACCTTTTCTC CAGCGCGCTG 
CTGGCAAACG GTTTATTCGA TGAACTCAAG GCATCACAGG GATGCGTGAT TAATATAACC 
TCGATTGCAG GGTCGCGTGT GCATCCCTTT GCTGGCGTAG CCTATGCCAC CTCAAAAGCG 
GCGCTATCGG CGTTGACGCG GGAAATGGCG TTTGATTTTG GTCCGCACGG CGTTCGCGTC 
AATGCGATTG CGCCGGGAGA AATCGAAACC TCGATTCTGT CACCCGGTAC GGATGACATT 
ATTGAACGAC AGGTGCCGAT GCAGCGCTTA GGTAAGCCCG AAGAGGTGGC AAGTTTGATC 
TATTTTCTCT GTACCTCCAG TGCTTCTTAC GTCAACGGTG CAGAAATCCA TGTGAATGGA 
GGACAGCATG TCTGA 

 

Protein sequence

MTAQKTLLLT GASRGIGHAT VKHFHAAGWR IFTASRQNWA EECPWAEKLL NHIHLDLEDI 
DSLQQTLPLI KEKLGGRLDA LVDNAGISPK GEGGQRLGIR DTDYATWLRV FNVNLFSSAL 
LANGLFDELK ASQGCVINIT SIAGSRVHPF AGVAYATSKA ALSALTREMA FDFGPHGVRV 
NAIAPGEIET SILSPGTDDI IERQVPMQRL GKPEEVASLI YFLCTSSASY VNGAEIHVNG 
GQHV