Gene Pecwa_2510 details

Gene Information

• Locus tag: Pecwa_2510
• ID: 8530911
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2722387
• End bp: 2723151
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 49%
• Product: Oligogalacturonate-specific porin
• Protein accession: YP_003259878
• Protein GI: 261821772

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0628975
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCTCA TAATGAAAAA ACGCTACCTT GTGGCTGGTA TTCTCTTTGC CCAAATTTAT 
GCTATCTCCG CGTCTGCTTC TGATACCAAA CTCAGCTATG AACATAGCTG GGGAACAATG 
AATCGCTATC ACGGTGATGA AATCGGTATG CGGCATTTTA TGGATAATGG CCTGTACGTT 
GGTGTTGAGC TGAATTTTTA TAATAAGAAT AAAGATCTGG CCATCGATGA TGTGGTCTCA 
AATTCTTATG CCTTTTATAC CGGTTATGCC TACAGCTTAA CGCCTGAATT AACCCTGACG 
CCGAATCTGG AAGCGCGCTT CTACTCCGGC GGCACCAGCG GTGAAGGCAC TGTGGGTGAT 
ATAGGCGCTA GCCAGAGTTC CGGCGCACGC TACACGCCAG GACTGAAGCT GACCTGGGCA 
GTGACTGATA AGACGGATCT TCATGCGCAA TATCGCTATG ACCTCAGAAA AATCACCCGC 
AGCAAGCGCA CCAGCACAGA TGATGACGCC CACCGCCACC GCTATGAAGC TGGCGTCGCC 
TACAAAGGCT TCGATAATTT CACGTTGGCG TATACCGCTT ACTACTATCA CGCGGATTAC 
GTGCTGCAAA ACAACAAGAA GCATGATTAT CAGCAGGATT TCGACGTGTC TTACACCATC 
AACGACAACT GGACAGCACA CGTTGGCGTT GAAGATGTCG CCAGCGGGCG CGATGTGAAA 
TCGCGTGAAG GGAAAGGAAA AGTCGGCTTC ACCTATACGT TCTAA 

 

Protein sequence

MVLIMKKRYL VAGILFAQIY AISASASDTK LSYEHSWGTM NRYHGDEIGM RHFMDNGLYV 
GVELNFYNKN KDLAIDDVVS NSYAFYTGYA YSLTPELTLT PNLEARFYSG GTSGEGTVGD 
IGASQSSGAR YTPGLKLTWA VTDKTDLHAQ YRYDLRKITR SKRTSTDDDA HRHRYEAGVA 
YKGFDNFTLA YTAYYYHADY VLQNNKKHDY QQDFDVSYTI NDNWTAHVGV EDVASGRDVK 
SREGKGKVGF TYTF