Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2483 |
Symbol | |
ID | 8530884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2690838 |
End bp | 2691863 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003259851 |
Protein GI | 261821745 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.467118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGACAA TGCAGGAAGT GGCGAAGAAA GCAGGCGTAT CAAAAGCGAC AGTGTCACGC GTGCTATCAG GCAAAGGCTA TACCAGTGAA GAAACCAAAG CGCTGGTCTA TCAGGCCATT GAGGAGACCG GATATCAGCC AAATTTACTA GCGCGTAATC TGGCGACCAG CAAATCAGCC TGTATTGGTT TGGTGGTGAC TAACACGCTC TATCACGGCA GCTATTTTAA CGAACTGCTG TCACAGGCCG CCAAGAAGCT CGAAGACAAC GGGCGTCAAC TCATTCTGGT TGACGGCAAA CACAGCGCCG ATGAAGAACG CGCCGCGATT CAATTTCTGC TGGGTTTACG CTGCGATGCG ATTATCATTT ATCCTCGTTT TCTCAACGTG GATCAGATGG ACGACATCAT CGGACAACAC AAGCAGCCGA TCATGGTCGT CAACCGTAAG CTACGTAAAC ACCAAAGCCA CTGCATTTGC TGCGATCACA AGGGCTCTAG CTATAACGCT ACGCAACATC TTATTGCGCG CGGTCATAAA GACATCGCGT TTATCACCGG CTCGCTGGAT TCGCCAACCG CTATCGAACG CCTTTCCGGC TATAAAGACG CGCTGACAGC AGCCAACATC GCAGTACGGG ATGAACTGAT TGTGAGAGGG AAATGGACGC CGCGCTGCGG CTCACTCGCC ATTGCTGCCC TACGCGATAG CCAGGTGTCG TTCAGTGCCG TTCTCGCCAG CAATGACGAT ATGGCGATTG GTGCGATGAA AGCGTTGGAT GAGGCCGGCG TTGCAGTACC GAGCGATGTC TCTGTGGTCG GGTTCGATGA TATCCCCACT GCCCCATTTT TGAAGCCGTC ACTCTCCAGC GTAAAAGATC CGGTGAGCGA TATGATCAAC GAAGTGATTC ACCGCTTGAT CGCGATGCTG GACGGCGGCT ATTTCTCGAA AGAGAACCTG TTTTTGTCTG AACTGCGGGT CAGGGACTCG ATTCAGGACG GGCCGTATGG TAACCAGCCC GCCTGA
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Protein sequence | MSTMQEVAKK AGVSKATVSR VLSGKGYTSE ETKALVYQAI EETGYQPNLL ARNLATSKSA CIGLVVTNTL YHGSYFNELL SQAAKKLEDN GRQLILVDGK HSADEERAAI QFLLGLRCDA IIIYPRFLNV DQMDDIIGQH KQPIMVVNRK LRKHQSHCIC CDHKGSSYNA TQHLIARGHK DIAFITGSLD SPTAIERLSG YKDALTAANI AVRDELIVRG KWTPRCGSLA IAALRDSQVS FSAVLASNDD MAIGAMKALD EAGVAVPSDV SVVGFDDIPT APFLKPSLSS VKDPVSDMIN EVIHRLIAML DGGYFSKENL FLSELRVRDS IQDGPYGNQP A
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